Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.52□□□□□ -1.21
NPAS3Q8IXF0 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 RN7SKP55-201ENST00000364888 307 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 SNRPEP2-201ENST00000397592 279 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 RPS3AP36-201ENST00000398190 775 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 NRBF2P2-201ENST00000413087 861 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 VDAC1P10-201ENST00000416715 891 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 USP9YP13-201ENST00000417797 480 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 RPL12P49-201ENST00000441100 121 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AC234771.4-201ENST00000441416 730 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AL592437.1-201ENST00000443781 492 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 snoZ278.1-201ENST00000517059 112 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 EEF1B2P1-201ENST00000567221 672 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 BNIP3P23-201ENST00000599655 511 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AC013244.1-201ENST00000604279 193 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AC007363.1-201ENST00000604736 620 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AC015819.1-201ENST00000613588 663 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 C2orf27A-204ENST00000623058 969 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AL353763.1-201ENST00000624467 1628 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 HYDIN2-203ENST00000614586 13885 ntBASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPAS3Q8IXF0 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC068860.1-201ENST00000623701 3736 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC051619.3-201ENST00000560646 2426 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC092634.1-201ENST00000366505 199 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 MIR152-201ENST00000385212 87 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC114482.1-201ENST00000418010 247 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 GTF2IP23-201ENST00000423746 351 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 MYO5BP3-201ENST00000431872 1279 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 CLUHP1-201ENST00000435012 1190 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC096632.2-201ENST00000438139 1239 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC123904.1-201ENST00000441072 368 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 RBMY3AP-201ENST00000449381 1145 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC091544.1-201ENST00000484702 348 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 EIF3LP3-201ENST00000495197 822 ntBASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.5□□□□□ -1.21
NPAS3Q8IXF0 AC139783.2-201ENST00000504847 1145 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms