Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RAB43Q86YS6 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RAB43Q86YS6 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.18□□□□□ -1.58
RAB43Q86YS6 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAB43Q86YS6 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAB43Q86YS6 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAB43Q86YS6 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAB43Q86YS6 ZNF733P-202ENST00000444809 1573 ntBASIC5.17□□□□□ -1.58
RAB43Q86YS6 AC007342.5-201ENST00000571340 2142 ntBASIC5.17□□□□□ -1.58
RAB43Q86YS6 AC112198.2-201ENST00000426589 6996 ntBASIC5.17□□□□□ -1.58
RAB43Q86YS6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAB43Q86YS6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAB43Q86YS6 RNA5SP335-201ENST00000363817 110 ntBASIC5.17□□□□□ -1.58
RAB43Q86YS6 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAB43Q86YS6 AL359265.1-201ENST00000440296 795 ntBASIC5.17□□□□□ -1.58
RAB43Q86YS6 FAR2P1-206ENST00000449736 709 ntBASIC5.17□□□□□ -1.58
RAB43Q86YS6 RN7SL727P-201ENST00000482164 296 ntBASIC5.17□□□□□ -1.58
RAB43Q86YS6 ATP5LP5-201ENST00000483050 299 ntBASIC5.17□□□□□ -1.58
RAB43Q86YS6 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 SCARNA16.4-201ENST00000516956 187 ntBASIC5.17□□□□□ -1.58
RAB43Q86YS6 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 HMGB1P40-201ENST00000525121 540 ntBASIC5.17□□□□□ -1.58
RAB43Q86YS6 OR8A2P-201ENST00000528631 952 ntBASIC5.17□□□□□ -1.58
RAB43Q86YS6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAB43Q86YS6 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAB43Q86YS6 AC011755.1-201ENST00000623763 2049 ntBASIC5.17□□□□□ -1.58
RAB43Q86YS6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAB43Q86YS6 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RAB43Q86YS6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAB43Q86YS6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAB43Q86YS6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RAB43Q86YS6 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.17□□□□□ -1.58
RAB43Q86YS6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAB43Q86YS6 AC011933.2-201ENST00000578539 2790 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.16□□□□□ -1.58
RAB43Q86YS6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAB43Q86YS6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAB43Q86YS6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAB43Q86YS6 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RAB43Q86YS6 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RAB43Q86YS6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAB43Q86YS6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RAB43Q86YS6 SNORA58B-201ENST00000364259 136 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 RN7SKP213-201ENST00000410746 298 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 AL390774.1-201ENST00000411924 246 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 GABARAPL3-201ENST00000412799 354 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 AL133482.1-201ENST00000415988 498 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.16□□□□□ -1.58
RAB43Q86YS6 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.16□□□□□ -1.58
RAB43Q86YS6 GAPDHP58-201ENST00000438477 1006 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.16□□□□□ -1.58
RAB43Q86YS6 AC005532.2-201ENST00000467154 373 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAB43Q86YS6 AC004815.1-201ENST00000484185 331 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 RPEP1-201ENST00000504507 658 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 ENPP7P11-201ENST00000505915 627 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.16□□□□□ -1.58
RAB43Q86YS6 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAB43Q86YS6 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.16□□□□□ -1.58
RAB43Q86YS6 GAPDHP62-201ENST00000515313 990 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 AC022832.1-201ENST00000530718 645 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 HMGN2P6-201ENST00000551091 273 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.16□□□□□ -1.58
RAB43Q86YS6 BLZF2P-201ENST00000553776 1130 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RAB43Q86YS6 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.16□□□□□ -1.58
RAB43Q86YS6 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.16□□□□□ -1.58
RAB43Q86YS6 MIR7155-201ENST00000615925 56 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 AL353684.1-201ENST00000622677 1120 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.16□□□□□ -1.58
RAB43Q86YS6 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RAB43Q86YS6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RAB43Q86YS6 MTCO1P7-201ENST00000419523 1542 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 AC053481.2-202ENST00000582394 1500 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RAB43Q86YS6 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.16□□□□□ -1.58
RAB43Q86YS6 AC093591.2-201ENST00000565254 3843 ntBASIC5.16□□□□□ -1.58
RAB43Q86YS6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RAB43Q86YS6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RAB43Q86YS6 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RAB43Q86YS6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.15□□□□□ -1.58
RAB43Q86YS6 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms