Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 RNU6-225P-201ENST00000384613 103 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 RPS27AP11-201ENST00000402798 447 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 HMGB1P13-201ENST00000406019 642 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AL357752.1-201ENST00000412817 349 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AC127526.2-201ENST00000426436 775 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AL022331.1-201ENST00000429025 477 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AL512637.2-201ENST00000431287 1256 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AP000936.3-201ENST00000438127 255 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 YWHAZP2-201ENST00000440317 728 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 H3F3BP1-201ENST00000440551 403 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 CYCSP51-201ENST00000443545 318 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 RPL34P26-201ENST00000445636 354 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AC069540.1-201ENST00000446320 988 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AL358876.1-201ENST00000453364 1075 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 NXT1P1-201ENST00000458481 316 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 RPS20P4-201ENST00000461659 355 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 SETP6-201ENST00000479329 568 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AC006539.1-201ENST00000481419 501 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 SCARNA6.1-201ENST00000516989 238 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 BUD31P1-201ENST00000521828 359 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AL121594.2-201ENST00000541658 472 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AC008083.2-201ENST00000546707 476 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AL109741.3-201ENST00000561748 592 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AC104072.1-201ENST00000568817 668 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 MIR3614-201ENST00000581261 86 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AC079610.2-201ENST00000604818 690 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AC112503.2-201ENST00000609005 552 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 RN7SL544P-201ENST00000617232 284 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 RN7SL763P-201ENST00000620922 284 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AC095038.2-201ENST00000621464 1070 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AC127024.6-201ENST00000621598 424 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AC087565.3-203ENST00000641018 837 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 MIR193BHG-214ENST00000641765 509 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 OR13C1P-202ENST00000641378 2919 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRRTM4Q86VH4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 HSPA8P17-201ENST00000427029 1382 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AC093775.1-201ENST00000624154 1868 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 TMSB4XP4-201ENST00000323496 618 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 RNU6-185P-201ENST00000384421 107 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 RNA5SP122-201ENST00000384457 108 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 MTCO2P1-201ENST00000424648 477 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 HMGB3P24-201ENST00000433260 622 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 AC004129.2-201ENST00000457229 287 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 RPL32P14-201ENST00000463196 378 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 PPIAP19-201ENST00000486414 492 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 OR7E157P-201ENST00000494376 911 ntBASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRTM4Q86VH4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms