Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUP54Q7Z3B4 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 U3.10-201ENST00000364459 214 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 RNA5SP284-201ENST00000384547 118 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 AL357752.1-201ENST00000412817 349 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 RNF10P1-201ENST00000418589 369 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 RPL34P3-201ENST00000421454 338 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 LRRC37A14P-201ENST00000452297 462 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 CLIC4P1-201ENST00000453177 535 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 AC004129.2-201ENST00000457229 287 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 RPS23P2-201ENST00000463671 415 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 OR7E157P-201ENST00000494376 911 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 RFPL4AP5-201ENST00000514977 504 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 CYCSP22-201ENST00000517555 339 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 FTH1P11-201ENST00000517577 551 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 IGLV3-30-201ENST00000524362 298 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 AC074029.2-201ENST00000551045 634 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 IGBP1P1-201ENST00000554337 1009 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 AC090607.5-201ENST00000615692 224 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 WBP1LP8-201ENST00000617401 327 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 AC073592.7-201ENST00000623659 507 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 AC019080.5-201ENST00000624891 757 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 CFTRP2-201ENST00000634304 199 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 MIR193BHG-214ENST00000641765 509 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 AL022311.1-201ENST00000623726 19416 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 AC091305.2-201ENST00000624049 1576 ntBASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
NUP54Q7Z3B4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 HSPD1P11-201ENST00000508643 1702 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AL159987.1-201ENST00000347911 293 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 RNU1-136P-201ENST00000384181 164 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 SDHDP6-201ENST00000414693 480 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 NIFKP3-201ENST00000417799 865 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 RPS26P13-201ENST00000419030 330 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AC006065.1-201ENST00000422539 802 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 MTATP6P11-201ENST00000428071 670 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 BX119321.1-201ENST00000428912 797 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AC073109.1-201ENST00000445066 978 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 RPL31P15-201ENST00000449770 338 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 RPL32P33-201ENST00000487023 394 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AC009120.1-201ENST00000493458 473 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 RNU6-491P-201ENST00000516099 110 ntBASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.28□□□□□ -1.56
NUP54Q7Z3B4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms