Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.56□□□□□ -1.52
RFWD3Q6PCD5 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFWD3Q6PCD5 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFWD3Q6PCD5 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFWD3Q6PCD5 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
RFWD3Q6PCD5 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
RFWD3Q6PCD5 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.56□□□□□ -1.52
RFWD3Q6PCD5 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFWD3Q6PCD5 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFWD3Q6PCD5 AC011493.1-201ENST00000596753 1632 ntBASIC5.56□□□□□ -1.52
RFWD3Q6PCD5 AC079097.1-201ENST00000512187 1399 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 AL078621.3-201ENST00000623707 2042 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 AC003973.3-201ENST00000624863 2822 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 AC005294.1-201ENST00000355509 281 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 RPL12P17-201ENST00000432393 498 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 CNOT7P2-201ENST00000441051 832 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 AURKAPS1-201ENST00000451805 1212 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 TAAR4P-201ENST00000454843 1039 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 RN7SL172P-201ENST00000460535 303 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 AC008638.1-201ENST00000506035 866 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 OR4A17P-201ENST00000526032 904 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 AC005341.1-201ENST00000571086 708 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 ICE2P1-201ENST00000512800 1849 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 OR55B1P-203ENST00000641518 2602 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 AC083899.1-201ENST00000454465 3819 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 PROS2P-201ENST00000474651 1951 ntBASIC5.55□□□□□ -1.52
RFWD3Q6PCD5 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 AC109780.1-201ENST00000451768 1344 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 AC011755.1-201ENST00000623763 2049 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 HSPA8P14-201ENST00000552265 1805 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 SNORA67-201ENST00000384423 137 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 MIR223-201ENST00000385204 110 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 AL445213.1-201ENST00000412589 747 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 AL139148.1-201ENST00000427122 680 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 GAPDHP25-201ENST00000447061 1001 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 FAR2P1-206ENST00000449736 709 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 RN7SL515P-201ENST00000463999 297 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 AC079841.1-201ENST00000481228 950 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 RN7SL727P-201ENST00000482164 296 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 AC058823.1-201ENST00000485315 474 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 AC091912.1-201ENST00000511351 248 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 RNA5SP373-201ENST00000517271 95 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 AC027308.1-201ENST00000517993 110 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 OR11J2P-201ENST00000555298 907 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 AC127381.1-201ENST00000555979 939 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 WBP1LP8-201ENST00000617401 327 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 OR4G1P-202ENST00000641173 1788 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 AC116158.1-201ENST00000560231 2129 ntBASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFWD3Q6PCD5 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 AL034549.2-201ENST00000618285 3373 ntBASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 DBIP1-201ENST00000401435 260 ntBASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 PPIAP9-201ENST00000403866 498 ntBASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 AC108075.1-201ENST00000424692 529 ntBASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 AC104634.1-201ENST00000452720 462 ntBASIC5.53□□□□□ -1.52
RFWD3Q6PCD5 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms