Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC007938.1-201ENST00000562524 2902 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 RNU1-5P-201ENST00000362684 144 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 RNA5SP188-201ENST00000362916 129 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 RNU6-413P-201ENST00000384115 107 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 MTCO1P56-201ENST00000401674 224 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 MIR1275-201ENST00000408770 80 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 RN7SKP271-201ENST00000410528 320 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC068138.1-201ENST00000412635 217 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AL139158.1-201ENST00000424719 340 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 TRIM60P3Y-201ENST00000432201 673 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 RPSAP32-201ENST00000432681 526 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 KCTD9P3-201ENST00000434597 1169 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 OR52Y1P-201ENST00000452418 828 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC026348.1-201ENST00000462549 1053 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 RN7SL654P-201ENST00000479178 292 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 SEPT10P1-201ENST00000517342 1162 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC021733.2-201ENST00000518830 497 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC011853.1-201ENST00000518911 454 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 uc_338.29-201ENST00000615099 168 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC104260.1-201ENST00000616660 539 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC061999.1-201ENST00000624454 177 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC019080.5-201ENST00000624891 757 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AL355377.1-201ENST00000621125 1653 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC006210.2-201ENST00000367074 1545 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC110597.1-201ENST00000562669 3176 ntBASIC7.05□□□□□ -1.28
RNF43Q68DV7 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
RNF43Q68DV7 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF43Q68DV7 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC092326.2-201ENST00000624772 1561 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 RPL9P21-201ENST00000392269 505 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 AL590635.1-201ENST00000406314 586 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 MIR1277-201ENST00000408536 78 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 RNU4-74P-201ENST00000411280 161 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms