Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC8.57□□□□□ -1.04
CDCA8Q53HL2 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AP001541.1-201ENST00000623322 1904 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC093225.1-201ENST00000506867 1408 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC007114.2-201ENST00000576014 4281 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 RNU1-134P-201ENST00000362935 165 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 RNU1-87P-201ENST00000363727 170 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 CRP-204ENST00000368112 787 ntTSL 2 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 DNAJC19P6-201ENST00000401853 280 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 HSD52-202ENST00000436225 772 ntTSL 3 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC023141.3-201ENST00000436698 278 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AL353706.1-201ENST00000436728 494 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AMYP1-201ENST00000440059 1023 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AL138878.2-201ENST00000440581 1241 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 PPIAP27-201ENST00000453800 265 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 RPS27AP3-201ENST00000453803 454 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC103563.5-201ENST00000455643 364 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 RN7SL165P-201ENST00000477476 291 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC108120.2-201ENST00000512973 294 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC079315.1-201ENST00000602952 623 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC087752.4-201ENST00000605911 462 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 OR2BH1P-201ENST00000608850 864 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 RDM1-219ENST00000615378 542 ntTSL 3 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 RFPL4AP6-201ENST00000616792 846 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC109454.4-201ENST00000623411 649 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AL359715.5-201ENST00000623431 443 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC025262.3-201ENST00000623666 360 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC116667.2-201ENST00000641075 823 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 HDAC1P2-201ENST00000453661 1398 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 AC022325.1-201ENST00000502748 2199 ntBASIC8.56□□□□□ -1.04
CDCA8Q53HL2 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDCA8Q53HL2 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 AC139426.3-201ENST00000605648 2059 ntBASIC8.55□□□□□ -1.04
CDCA8Q53HL2 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 Y_RNA.194-201ENST00000363985 102 ntBASIC8.55□□□□□ -1.04
CDCA8Q53HL2 MCTS2P-201ENST00000394552 546 ntBASIC8.55□□□□□ -1.04
CDCA8Q53HL2 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 AL451046.1-201ENST00000406097 534 ntBASIC8.55□□□□□ -1.04
CDCA8Q53HL2 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 TRIM60P9Y-201ENST00000438459 816 ntBASIC8.55□□□□□ -1.04
CDCA8Q53HL2 AL353662.1-201ENST00000439099 327 ntBASIC8.55□□□□□ -1.04
CDCA8Q53HL2 MTND5P2-201ENST00000442927 1142 ntBASIC8.55□□□□□ -1.04
CDCA8Q53HL2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 TRIM60P11Y-201ENST00000445313 801 ntBASIC8.55□□□□□ -1.04
CDCA8Q53HL2 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 RN7SL221P-201ENST00000466190 281 ntBASIC8.55□□□□□ -1.04
CDCA8Q53HL2 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 CBX1-205ENST00000495350 550 ntTSL 2 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 FAU-203ENST00000525297 355 ntTSL 5 BASIC8.55□□□□□ -1.04
CDCA8Q53HL2 AC005363.1-201ENST00000530779 351 ntBASIC8.55□□□□□ -1.04
CDCA8Q53HL2 AC090826.1-203ENST00000569235 490 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms