Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.34□□□□□ -1.55
AP1S1P61966 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
AP1S1P61966 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.34□□□□□ -1.55
AP1S1P61966 AL162431.4-201ENST00000604674 411 ntBASIC5.34□□□□□ -1.55
AP1S1P61966 AC126915.2-201ENST00000610957 190 ntBASIC5.34□□□□□ -1.55
AP1S1P61966 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.34□□□□□ -1.55
AP1S1P61966 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.34□□□□□ -1.55
AP1S1P61966 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.34□□□□□ -1.55
AP1S1P61966 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.34□□□□□ -1.55
AP1S1P61966 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.34□□□□□ -1.55
AP1S1P61966 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S1P61966 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S1P61966 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP1S1P61966 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
AP1S1P61966 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
AP1S1P61966 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.34□□□□□ -1.55
AP1S1P61966 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
AP1S1P61966 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
AP1S1P61966 AC011493.1-201ENST00000596753 1632 ntBASIC5.34□□□□□ -1.56
AP1S1P61966 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
AP1S1P61966 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.56
AP1S1P61966 AL590763.1-201ENST00000398297 1545 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S1P61966 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S1P61966 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S1P61966 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S1P61966 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S1P61966 GPS2P1-201ENST00000411761 986 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 AL121878.1-201ENST00000418638 859 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 FTLP19-201ENST00000433300 394 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 RPL19P16-201ENST00000433839 588 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 AL161722.2-201ENST00000434731 981 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S1P61966 AC090804.1-201ENST00000448870 490 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S1P61966 FAR2P1-206ENST00000449736 709 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S1P61966 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S1P61966 RN7SL629P-201ENST00000489622 285 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 GTF2F2P1-201ENST00000511083 675 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 RNA5SP34-201ENST00000516887 130 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 AC012400.1-201ENST00000518452 381 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S1P61966 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.33□□□□□ -1.56
AP1S1P61966 AC009852.2-201ENST00000567898 485 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 MIR1269B-201ENST00000580405 75 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 AC095055.1-201ENST00000603472 1113 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 AC008814.1-201ENST00000603797 406 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 AC138965.3-201ENST00000623875 498 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 MTCO1P1-201ENST00000624263 1081 ntBASIC5.33□□□□□ -1.56
AP1S1P61966 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S1P61966 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
AP1S1P61966 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.33□□□□□ -1.56
AP1S1P61966 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
AP1S1P61966 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AP1S1P61966 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S1P61966 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S1P61966 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S1P61966 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S1P61966 AC023421.1-201ENST00000590535 1785 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S1P61966 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
AP1S1P61966 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S1P61966 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S1P61966 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S1P61966 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S1P61966 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S1P61966 RNU6-171P-201ENST00000384354 107 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 RNA5SP241-201ENST00000391326 114 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 NUDT19P3-201ENST00000404698 555 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.32□□□□□ -1.56
AP1S1P61966 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.32□□□□□ -1.56
AP1S1P61966 NANOGP4-201ENST00000427230 913 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 CLUHP1-201ENST00000435012 1190 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 CNOT7P2-201ENST00000441051 832 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 AC245047.2-201ENST00000441060 530 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 AL163193.1-201ENST00000444895 788 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 AC079841.1-201ENST00000481228 950 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 RPL7P41-201ENST00000485823 957 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 AC105420.1-201ENST00000504389 582 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 HIGD1AP14-201ENST00000507617 282 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 AC006427.1-201ENST00000514359 712 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S1P61966 AC024940.3-201ENST00000538551 316 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S1P61966 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.32□□□□□ -1.56
AP1S1P61966 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.32□□□□□ -1.56
AP1S1P61966 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S1P61966 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S1P61966 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S1P61966 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.32□□□□□ -1.56
AP1S1P61966 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.32□□□□□ -1.56
AP1S1P61966 ZNF733P-202ENST00000444809 1573 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S1P61966 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S1P61966 AC026523.2-201ENST00000625039 7739 ntBASIC5.32□□□□□ -1.56
AP1S1P61966 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
AP1S1P61966 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.32□□□□□ -1.56
AP1S1P61966 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP1S1P61966 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms