Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.59□□□□□ -1.51
SUMO3P55854 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.59□□□□□ -1.51
SUMO3P55854 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SUMO3P55854 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
SUMO3P55854 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SUMO3P55854 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SUMO3P55854 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SUMO3P55854 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SUMO3P55854 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.59□□□□□ -1.51
SUMO3P55854 RNU1-87P-201ENST00000363727 170 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 RNU6-636P-201ENST00000384598 107 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SUMO3P55854 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 AL035422.1-201ENST00000414193 397 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SUMO3P55854 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.59□□□□□ -1.51
SUMO3P55854 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.59□□□□□ -1.51
SUMO3P55854 AC005005.2-201ENST00000420779 380 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.59□□□□□ -1.51
SUMO3P55854 AC108479.1-201ENST00000431142 427 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.59□□□□□ -1.51
SUMO3P55854 PSMD10P2-201ENST00000432890 672 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 GAPDHP59-201ENST00000435908 267 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.59□□□□□ -1.51
SUMO3P55854 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SUMO3P55854 AL935212.3-201ENST00000450729 284 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.59□□□□□ -1.51
SUMO3P55854 RN7SL352P-201ENST00000466002 277 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SUMO3P55854 HPRT1P2-201ENST00000505250 544 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 AC091860.1-201ENST00000505723 432 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 PRMT5P1-201ENST00000514351 598 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.59□□□□□ -1.51
SUMO3P55854 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.59□□□□□ -1.51
SUMO3P55854 AC125612.1-201ENST00000547580 377 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.59□□□□□ -1.51
SUMO3P55854 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SUMO3P55854 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.59□□□□□ -1.51
SUMO3P55854 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.59□□□□□ -1.51
SUMO3P55854 GARSP1-201ENST00000570895 719 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.59□□□□□ -1.51
SUMO3P55854 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.59□□□□□ -1.51
SUMO3P55854 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.59□□□□□ -1.51
SUMO3P55854 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.59□□□□□ -1.51
SUMO3P55854 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
SUMO3P55854 AC025588.2-201ENST00000604851 466 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.59□□□□□ -1.51
SUMO3P55854 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SUMO3P55854 MIR7973-1-201ENST00000614683 76 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 FAM27E2-201ENST00000619668 403 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.59□□□□□ -1.51
SUMO3P55854 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.59□□□□□ -1.51
SUMO3P55854 AC068057.2-201ENST00000624047 895 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 AL162377.2-201ENST00000624532 337 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 AC019226.2-201ENST00000625973 424 ntBASIC5.59□□□□□ -1.51
SUMO3P55854 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.59□□□□□ -1.51
SUMO3P55854 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.59□□□□□ -1.51
SUMO3P55854 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
SUMO3P55854 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SUMO3P55854 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SUMO3P55854 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SUMO3P55854 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.59□□□□□ -1.52
SUMO3P55854 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.59□□□□□ -1.52
SUMO3P55854 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.59□□□□□ -1.52
SUMO3P55854 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SUMO3P55854 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SUMO3P55854 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.59□□□□□ -1.52
SUMO3P55854 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
SUMO3P55854 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SUMO3P55854 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SUMO3P55854 WBP11P1-201ENST00000562560 1931 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SUMO3P55854 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SUMO3P55854 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SUMO3P55854 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SUMO3P55854 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.58□□□□□ -1.52
SUMO3P55854 MTCO1P6-201ENST00000481192 1384 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AL591135.1-201ENST00000401578 5914 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
SUMO3P55854 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SUMO3P55854 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
SUMO3P55854 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.58□□□□□ -1.52
SUMO3P55854 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SUMO3P55854 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SUMO3P55854 IGKV7-3-201ENST00000357453 298 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 SNORA21-201ENST00000362423 132 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.58□□□□□ -1.52
SUMO3P55854 Y_RNA.472-201ENST00000384322 102 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 MIR525-201ENST00000384978 85 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.58□□□□□ -1.52
SUMO3P55854 RPL35AP31-201ENST00000418340 337 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 HMGB1P49-201ENST00000418882 569 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 AC015977.1-201ENST00000418887 292 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 RPS15AP30-201ENST00000420976 390 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 RPL12P12-201ENST00000424633 501 ntBASIC5.58□□□□□ -1.52
SUMO3P55854 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.58□□□□□ -1.52
SUMO3P55854 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.58□□□□□ -1.52
SUMO3P55854 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.58□□□□□ -1.52
SUMO3P55854 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.58□□□□□ -1.52
SUMO3P55854 EEF1A1P39-201ENST00000440791 250 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms