Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH13P55290 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH13P55290 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH13P55290 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.36□□□□□ -1.55
CDH13P55290 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH13P55290 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH13P55290 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH13P55290 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH13P55290 AC107977.1-201ENST00000355745 939 ntBASIC5.36□□□□□ -1.55
CDH13P55290 RNA5SP433-201ENST00000364491 114 ntBASIC5.36□□□□□ -1.55
CDH13P55290 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH13P55290 MIR137-201ENST00000385223 102 ntBASIC5.36□□□□□ -1.55
CDH13P55290 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH13P55290 BTF3P9-201ENST00000418784 283 ntBASIC5.36□□□□□ -1.55
CDH13P55290 MTND4LP13-201ENST00000425022 298 ntBASIC5.36□□□□□ -1.55
CDH13P55290 AC115283.1-201ENST00000427353 400 ntBASIC5.36□□□□□ -1.55
CDH13P55290 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH13P55290 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH13P55290 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH13P55290 HMGB3P10-201ENST00000434734 572 ntBASIC5.36□□□□□ -1.55
CDH13P55290 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH13P55290 CBX1P2-201ENST00000453841 458 ntBASIC5.36□□□□□ -1.55
CDH13P55290 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH13P55290 RN7SL170P-201ENST00000487098 295 ntBASIC5.36□□□□□ -1.55
CDH13P55290 RPL37P23-201ENST00000492641 294 ntBASIC5.36□□□□□ -1.55
CDH13P55290 ASNSP4-201ENST00000511103 447 ntBASIC5.36□□□□□ -1.55
CDH13P55290 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH13P55290 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH13P55290 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH13P55290 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH13P55290 LINC00557-201ENST00000563184 1279 ntBASIC5.36□□□□□ -1.55
CDH13P55290 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH13P55290 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH13P55290 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CDH13P55290 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.36□□□□□ -1.55
CDH13P55290 AP000769.2-201ENST00000602344 396 ntBASIC5.36□□□□□ -1.55
CDH13P55290 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH13P55290 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH13P55290 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH13P55290 AP005431.1-201ENST00000618479 319 ntBASIC5.36□□□□□ -1.55
CDH13P55290 AC006213.5-201ENST00000619673 288 ntBASIC5.36□□□□□ -1.55
CDH13P55290 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH13P55290 AC105105.5-201ENST00000622635 1294 ntBASIC5.36□□□□□ -1.55
CDH13P55290 AC020923.1-201ENST00000624021 917 ntBASIC5.36□□□□□ -1.55
CDH13P55290 AC073593.1-201ENST00000624500 411 ntBASIC5.36□□□□□ -1.55
CDH13P55290 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH13P55290 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH13P55290 TCP11X1-202ENST00000622971 1372 ntBASIC5.36□□□□□ -1.55
CDH13P55290 DDX6P1-205ENST00000441966 1436 ntBASIC5.36□□□□□ -1.55
CDH13P55290 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH13P55290 AL138820.1-201ENST00000617901 5305 ntBASIC5.36□□□□□ -1.55
CDH13P55290 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CDH13P55290 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CDH13P55290 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH13P55290 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH13P55290 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH13P55290 AL353796.1-201ENST00000561542 3241 ntBASIC5.36□□□□□ -1.55
CDH13P55290 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH13P55290 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH13P55290 MAPK10-328ENST00000641553 4009 ntBASIC5.36□□□□□ -1.55
CDH13P55290 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH13P55290 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH13P55290 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH13P55290 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH13P55290 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH13P55290 AL078621.3-201ENST00000623707 2042 ntBASIC5.35□□□□□ -1.55
CDH13P55290 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH13P55290 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH13P55290 MRRFP1-201ENST00000435941 1675 ntBASIC5.35□□□□□ -1.55
CDH13P55290 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH13P55290 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH13P55290 RN7SKP275-201ENST00000364626 301 ntBASIC5.35□□□□□ -1.55
CDH13P55290 RNU6-729P-201ENST00000384399 107 ntBASIC5.35□□□□□ -1.55
CDH13P55290 RNU6-1263P-201ENST00000384601 106 ntBASIC5.35□□□□□ -1.55
CDH13P55290 OR7E156P-201ENST00000400303 464 ntBASIC5.35□□□□□ -1.55
CDH13P55290 AC099535.1-201ENST00000408928 371 ntBASIC5.35□□□□□ -1.55
CDH13P55290 AC019070.1-201ENST00000415008 1024 ntBASIC5.35□□□□□ -1.55
CDH13P55290 HYALP1-201ENST00000417674 1279 ntBASIC5.35□□□□□ -1.55
CDH13P55290 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH13P55290 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH13P55290 MTND4P15-201ENST00000437913 1033 ntBASIC5.35□□□□□ -1.55
CDH13P55290 AL358876.1-201ENST00000453364 1075 ntBASIC5.35□□□□□ -1.55
CDH13P55290 IGBP1P4-201ENST00000503202 879 ntBASIC5.35□□□□□ -1.55
CDH13P55290 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH13P55290 RNU6-615P-201ENST00000516065 106 ntBASIC5.35□□□□□ -1.55
CDH13P55290 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH13P55290 OR8G3P-201ENST00000533406 921 ntBASIC5.35□□□□□ -1.55
CDH13P55290 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CDH13P55290 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH13P55290 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH13P55290 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH13P55290 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH13P55290 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH13P55290 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH13P55290 MIR7109-201ENST00000613748 65 ntBASIC5.35□□□□□ -1.55
CDH13P55290 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH13P55290 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH13P55290 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH13P55290 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH13P55290 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms