Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCNKAP51800 RPL7L1P4-201ENST00000513004 707 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CLCNKAP51800 RNA5SP362-201ENST00000516048 118 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 AC092451.2-201ENST00000538746 658 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.5□□□□□ -1.53
CLCNKAP51800 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCNKAP51800 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCNKAP51800 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCNKAP51800 DUX4L52-201ENST00000549363 777 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 AC007225.2-201ENST00000562529 256 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCNKAP51800 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLCNKAP51800 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLCNKAP51800 DHFRP1-201ENST00000579682 559 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCNKAP51800 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCNKAP51800 AC098483.2-201ENST00000603158 454 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 AC002069.2-201ENST00000603580 883 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCNKAP51800 AC022467.1-201ENST00000614738 749 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCNKAP51800 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCNKAP51800 LINC00216-201ENST00000623548 1126 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 AC021766.1-201ENST00000624404 741 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLCNKAP51800 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.5□□□□□ -1.53
CLCNKAP51800 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCNKAP51800 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCNKAP51800 AL512283.1-201ENST00000606756 1384 ntBASIC5.5□□□□□ -1.53
CLCNKAP51800 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCNKAP51800 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCNKAP51800 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CLCNKAP51800 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CLCNKAP51800 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CLCNKAP51800 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.5□□□□□ -1.53
CLCNKAP51800 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCNKAP51800 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
CLCNKAP51800 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CLCNKAP51800 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.49□□□□□ -1.53
CLCNKAP51800 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCNKAP51800 MTCO1P11-201ENST00000429111 1528 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 AC097461.1-201ENST00000568928 2821 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCNKAP51800 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCNKAP51800 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCNKAP51800 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCNKAP51800 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLCNKAP51800 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CLCNKAP51800 GAPDHP24-201ENST00000328713 983 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 MIR551A-201ENST00000385042 96 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 AC096921.1-201ENST00000411661 375 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCNKAP51800 MTND4LP14-201ENST00000429447 288 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 TMEM183AP1-205ENST00000432739 290 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCNKAP51800 AL138787.1-202ENST00000437804 898 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 SPRYD7P1-201ENST00000443861 570 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 VDAC2P4-201ENST00000452925 711 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 RN7SL583P-201ENST00000475692 287 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 ATP5LP5-201ENST00000483050 299 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 AC025768.1-201ENST00000510057 267 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCNKAP51800 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCNKAP51800 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCNKAP51800 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.49□□□□□ -1.53
CLCNKAP51800 NPM1P52-201ENST00000518264 846 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 AC136777.2-201ENST00000522979 358 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 OR7E10P-201ENST00000526420 991 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.49□□□□□ -1.53
CLCNKAP51800 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCNKAP51800 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.49□□□□□ -1.53
CLCNKAP51800 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCNKAP51800 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCNKAP51800 AC019322.1-201ENST00000571869 389 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 H3F3BP2-201ENST00000583907 357 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 AC060780.2-201ENST00000589047 198 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLCNKAP51800 AC010245.2-201ENST00000606908 1167 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 AC135803.1-201ENST00000608748 565 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 AL356608.1-201ENST00000610034 820 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCNKAP51800 AC025574.2-201ENST00000615621 514 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 AC106858.1-201ENST00000637497 429 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 AC083899.2-201ENST00000423285 1376 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.49□□□□□ -1.53
CLCNKAP51800 CASC19-248ENST00000641674 1356 ntBASIC5.49□□□□□ -1.53
CLCNKAP51800 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CLCNKAP51800 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCNKAP51800 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCNKAP51800 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCNKAP51800 CIR1P2-201ENST00000514821 1342 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CLCNKAP51800 ADAM24P-201ENST00000398655 2101 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCNKAP51800 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCNKAP51800 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.48□□□□□ -1.53
CLCNKAP51800 AC004656.1-201ENST00000568479 4951 ntBASIC5.48□□□□□ -1.53
CLCNKAP51800 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.48□□□□□ -1.53
CLCNKAP51800 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms