Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC235565.1-201ENST00000456962 1325 ntBASIC5.71□□□□□ -1.5
CASP4P49662 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
CASP4P49662 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.71□□□□□ -1.5
CASP4P49662 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
CASP4P49662 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.7□□□□□ -1.5
CASP4P49662 AC006210.2-201ENST00000367074 1545 ntBASIC5.7□□□□□ -1.5
CASP4P49662 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CASP4P49662 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CASP4P49662 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CASP4P49662 RNA5SP90-201ENST00000364801 99 ntBASIC5.7□□□□□ -1.5
CASP4P49662 SNORA67-201ENST00000384423 137 ntBASIC5.7□□□□□ -1.5
CASP4P49662 U3.23-201ENST00000391132 200 ntBASIC5.7□□□□□ -1.5
CASP4P49662 AC108075.1-201ENST00000424692 529 ntBASIC5.7□□□□□ -1.5
CASP4P49662 AL136231.1-201ENST00000429407 730 ntBASIC5.7□□□□□ -1.5
CASP4P49662 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.7□□□□□ -1.5
CASP4P49662 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.7□□□□□ -1.5
CASP4P49662 PRPF38AP1-201ENST00000451976 933 ntBASIC5.7□□□□□ -1.5
CASP4P49662 RN7SL189P-201ENST00000468631 289 ntBASIC5.7□□□□□ -1.5
CASP4P49662 COPS8P2-201ENST00000473228 627 ntBASIC5.7□□□□□ -1.5
CASP4P49662 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CASP4P49662 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.7□□□□□ -1.5
CASP4P49662 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CASP4P49662 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CASP4P49662 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.7□□□□□ -1.5
CASP4P49662 AC091932.2-201ENST00000623014 291 ntBASIC5.7□□□□□ -1.5
CASP4P49662 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.7□□□□□ -1.5
CASP4P49662 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.7□□□□□ -1.5
CASP4P49662 AP002505.2-201ENST00000623585 696 ntBASIC5.7□□□□□ -1.5
CASP4P49662 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.7□□□□□ -1.5
CASP4P49662 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.7□□□□□ -1.5
CASP4P49662 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.7□□□□□ -1.5
CASP4P49662 AC074101.1-201ENST00000637861 241 ntBASIC5.7□□□□□ -1.5
CASP4P49662 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CASP4P49662 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.7□□□□□ -1.5
CASP4P49662 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CASP4P49662 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CASP4P49662 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.7□□□□□ -1.5
CASP4P49662 SMG1P7-201ENST00000565246 2704 ntBASIC5.69□□□□□ -1.5
CASP4P49662 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CASP4P49662 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.69□□□□□ -1.5
CASP4P49662 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CASP4P49662 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CASP4P49662 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CASP4P49662 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CASP4P49662 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.69□□□□□ -1.5
CASP4P49662 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CASP4P49662 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CASP4P49662 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CASP4P49662 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CASP4P49662 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CASP4P49662 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CASP4P49662 RNU1-43P-201ENST00000365052 165 ntBASIC5.69□□□□□ -1.5
CASP4P49662 AC092642.1-201ENST00000392417 425 ntBASIC5.69□□□□□ -1.5
CASP4P49662 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.69□□□□□ -1.5
CASP4P49662 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.69□□□□□ -1.5
CASP4P49662 OR52B5P-201ENST00000435337 951 ntBASIC5.69□□□□□ -1.5
CASP4P49662 SERPINA7P1-201ENST00000443077 631 ntBASIC5.69□□□□□ -1.5
CASP4P49662 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.69□□□□□ -1.5
CASP4P49662 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.69□□□□□ -1.5
CASP4P49662 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.69□□□□□ -1.5
CASP4P49662 RPS4XP20-201ENST00000505751 772 ntBASIC5.69□□□□□ -1.5
CASP4P49662 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.69□□□□□ -1.5
CASP4P49662 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.69□□□□□ -1.5
CASP4P49662 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.69□□□□□ -1.5
CASP4P49662 AL049779.2-201ENST00000553847 315 ntBASIC5.69□□□□□ -1.5
CASP4P49662 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.69□□□□□ -1.5
CASP4P49662 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.69□□□□□ -1.5
CASP4P49662 MIR1269B-201ENST00000580405 75 ntBASIC5.69□□□□□ -1.5
CASP4P49662 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.69□□□□□ -1.5
CASP4P49662 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.69□□□□□ -1.5
CASP4P49662 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.69□□□□□ -1.5
CASP4P49662 FRG1EP-201ENST00000634469 770 ntBASIC5.69□□□□□ -1.5
CASP4P49662 OR52B5P-202ENST00000641118 1110 ntBASIC5.69□□□□□ -1.5
CASP4P49662 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CASP4P49662 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CASP4P49662 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CASP4P49662 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CASP4P49662 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CASP4P49662 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CASP4P49662 MAPK10-328ENST00000641553 4009 ntBASIC5.69□□□□□ -1.5
CASP4P49662 AC068870.3-201ENST00000625077 2536 ntBASIC5.69□□□□□ -1.5
CASP4P49662 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CASP4P49662 MTCO1P7-201ENST00000419523 1542 ntBASIC5.69□□□□□ -1.5
CASP4P49662 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.68□□□□□ -1.5
CASP4P49662 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
CASP4P49662 ADAM5-202ENST00000399789 1942 ntBASIC5.68□□□□□ -1.5
CASP4P49662 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CASP4P49662 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CASP4P49662 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.68□□□□□ -1.5
CASP4P49662 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CASP4P49662 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.68□□□□□ -1.5
CASP4P49662 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CASP4P49662 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CASP4P49662 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CASP4P49662 AC007618.1-201ENST00000366455 732 ntBASIC5.68□□□□□ -1.5
CASP4P49662 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CASP4P49662 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CASP4P49662 RNU1-74P-201ENST00000384108 171 ntBASIC5.68□□□□□ -1.5
CASP4P49662 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CASP4P49662 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms