Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC017019.1-201ENST00000426129 261 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.72□□□□□ -1.65
CX3CR1P49238 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.72□□□□□ -1.65
CX3CR1P49238 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.72□□□□□ -1.65
CX3CR1P49238 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CR1P49238 SUMO2P3-201ENST00000438311 288 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 AC016772.1-201ENST00000444170 1261 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 AC012512.1-201ENST00000446594 718 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CR1P49238 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CR1P49238 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CR1P49238 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CR1P49238 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CR1P49238 AC138866.2-201ENST00000508650 584 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 FTH1P11-201ENST00000517577 551 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 AP002981.1-201ENST00000517692 975 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.72□□□□□ -1.65
CX3CR1P49238 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.72□□□□□ -1.65
CX3CR1P49238 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CR1P49238 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.72□□□□□ -1.65
CX3CR1P49238 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CR1P49238 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CR1P49238 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CR1P49238 AC010547.6-201ENST00000571789 193 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 AC009027.1-201ENST00000604510 479 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 AC007683.2-201ENST00000624681 714 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CR1P49238 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.72□□□□□ -1.65
CX3CR1P49238 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CR1P49238 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CR1P49238 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.72□□□□□ -1.65
CX3CR1P49238 AC079298.1-201ENST00000625026 1619 ntBASIC4.72□□□□□ -1.65
CX3CR1P49238 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
CX3CR1P49238 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.71□□□□□ -1.65
CX3CR1P49238 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CX3CR1P49238 MRRFP1-201ENST00000435941 1675 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CX3CR1P49238 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.71□□□□□ -1.66
CX3CR1P49238 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CR1P49238 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CR1P49238 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CX3CR1P49238 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.71□□□□□ -1.66
CX3CR1P49238 RNU1-19P-201ENST00000363306 165 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 RNA5SP510-201ENST00000364697 99 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CR1P49238 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.71□□□□□ -1.66
CX3CR1P49238 OR1L6-202ENST00000373684 1044 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 RNA5SP122-201ENST00000384457 108 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 RNA5SP284-201ENST00000384547 118 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 RNU6-1320P-201ENST00000390838 107 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 RNU6-1269P-201ENST00000391139 107 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 DBIP1-201ENST00000401435 260 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 AL596448.1-201ENST00000415024 392 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.71□□□□□ -1.66
CX3CR1P49238 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.71□□□□□ -1.66
CX3CR1P49238 TNPO1P1-201ENST00000423641 1138 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 GSTM5P1-201ENST00000434751 660 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 AC002504.1-201ENST00000438281 691 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 AC019185.1-201ENST00000442718 389 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.71□□□□□ -1.66
CX3CR1P49238 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CR1P49238 AL672138.1-201ENST00000450604 1015 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 RNU6-599P-201ENST00000459383 107 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 RNU6-1193P-201ENST00000459461 107 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 AC093827.1-201ENST00000480094 861 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CR1P49238 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.71□□□□□ -1.66
CX3CR1P49238 AC016559.2-201ENST00000510759 359 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 SNORD46.2-201ENST00000516021 102 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 RNU6-513P-201ENST00000516104 104 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 AC092709.1-201ENST00000521355 1045 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.71□□□□□ -1.66
CX3CR1P49238 MIR4472-2-201ENST00000582069 67 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 RN7SL356P-201ENST00000582228 248 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 AC027243.2-201ENST00000602530 724 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
CX3CR1P49238 AC109583.2-201ENST00000617367 129 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CR1P49238 RNU6-368P-201ENST00000620928 107 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 RNU6-538P-201ENST00000622329 107 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 AC132068.1-201ENST00000623805 459 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.71□□□□□ -1.66
CX3CR1P49238 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.71□□□□□ -1.66
CX3CR1P49238 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CR1P49238 ADAM5-202ENST00000399789 1942 ntBASIC4.71□□□□□ -1.66
CX3CR1P49238 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.71□□□□□ -1.66
CX3CR1P49238 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CX3CR1P49238 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CX3CR1P49238 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CR1P49238 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.71□□□□□ -1.66
CX3CR1P49238 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.71□□□□□ -1.66
CX3CR1P49238 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CR1P49238 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CX3CR1P49238 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CR1P49238 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CR1P49238 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CR1P49238 TCP1P3-201ENST00000414406 1498 ntBASIC4.7□□□□□ -1.66
CX3CR1P49238 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.7□□□□□ -1.66
CX3CR1P49238 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms