Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RPS3AP2-201ENST00000407190 754 ntBASIC5.81□□□□□ -1.48
SSR1P43307 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.81□□□□□ -1.48
SSR1P43307 RIMKLBP2-201ENST00000424737 654 ntBASIC5.81□□□□□ -1.48
SSR1P43307 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SSR1P43307 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.81□□□□□ -1.48
SSR1P43307 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.81□□□□□ -1.48
SSR1P43307 AC011476.1-201ENST00000466725 307 ntBASIC5.81□□□□□ -1.48
SSR1P43307 RNU6-615P-201ENST00000516065 106 ntBASIC5.81□□□□□ -1.48
SSR1P43307 IGKV2-4-201ENST00000523070 340 ntBASIC5.81□□□□□ -1.48
SSR1P43307 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.81□□□□□ -1.48
SSR1P43307 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SSR1P43307 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.81□□□□□ -1.48
SSR1P43307 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.81□□□□□ -1.48
SSR1P43307 AC134669.1-201ENST00000581275 672 ntBASIC5.81□□□□□ -1.48
SSR1P43307 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SSR1P43307 AL096712.1-201ENST00000614561 159 ntBASIC5.81□□□□□ -1.48
SSR1P43307 CXADRP3-202ENST00000617265 1100 ntBASIC5.81□□□□□ -1.48
SSR1P43307 AP001962.1-201ENST00000624114 559 ntBASIC5.81□□□□□ -1.48
SSR1P43307 AC021766.1-201ENST00000624404 741 ntBASIC5.81□□□□□ -1.48
SSR1P43307 SAMMSON-227ENST00000642114 1199 ntBASIC5.81□□□□□ -1.48
SSR1P43307 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSR1P43307 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.81□□□□□ -1.48
SSR1P43307 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SSR1P43307 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.81□□□□□ -1.48
SSR1P43307 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SSR1P43307 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.81□□□□□ -1.48
SSR1P43307 MAPK10-286ENST00000641208 8747 ntBASIC5.81□□□□□ -1.48
SSR1P43307 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSR1P43307 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSR1P43307 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.8□□□□□ -1.48
SSR1P43307 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSR1P43307 AC093535.2-201ENST00000624769 2326 ntBASIC5.8□□□□□ -1.48
SSR1P43307 AC005332.5-201ENST00000591222 2919 ntBASIC5.8□□□□□ -1.48
SSR1P43307 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SSR1P43307 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSR1P43307 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.8□□□□□ -1.48
SSR1P43307 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSR1P43307 RPL24P2-201ENST00000421023 475 ntBASIC5.8□□□□□ -1.48
SSR1P43307 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.8□□□□□ -1.48
SSR1P43307 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.8□□□□□ -1.48
SSR1P43307 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSR1P43307 AC104843.2-201ENST00000427666 297 ntBASIC5.8□□□□□ -1.48
SSR1P43307 NDUFB4P8-201ENST00000435351 367 ntBASIC5.8□□□□□ -1.48
SSR1P43307 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.8□□□□□ -1.48
SSR1P43307 CBX1P2-201ENST00000453841 458 ntBASIC5.8□□□□□ -1.48
SSR1P43307 RPS3AP15-201ENST00000483874 781 ntBASIC5.8□□□□□ -1.48
SSR1P43307 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSR1P43307 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.8□□□□□ -1.48
SSR1P43307 SNORA43.3-201ENST00000517240 103 ntBASIC5.8□□□□□ -1.48
SSR1P43307 NPM1P6-201ENST00000521088 871 ntBASIC5.8□□□□□ -1.48
SSR1P43307 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.8□□□□□ -1.48
SSR1P43307 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.8□□□□□ -1.48
SSR1P43307 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.8□□□□□ -1.48
SSR1P43307 DPPA2P4-201ENST00000563717 878 ntBASIC5.8□□□□□ -1.48
SSR1P43307 CD24P2-201ENST00000565486 219 ntBASIC5.8□□□□□ -1.48
SSR1P43307 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.8□□□□□ -1.48
SSR1P43307 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.8□□□□□ -1.48
SSR1P43307 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.8□□□□□ -1.48
SSR1P43307 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.8□□□□□ -1.48
SSR1P43307 AL499605.1-201ENST00000604628 403 ntBASIC5.8□□□□□ -1.48
SSR1P43307 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.8□□□□□ -1.48
SSR1P43307 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.8□□□□□ -1.48
SSR1P43307 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.8□□□□□ -1.48
SSR1P43307 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.8□□□□□ -1.48
SSR1P43307 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSR1P43307 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSR1P43307 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSR1P43307 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSR1P43307 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.79□□□□□ -1.48
SSR1P43307 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.79□□□□□ -1.48
SSR1P43307 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SSR1P43307 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SSR1P43307 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSR1P43307 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSR1P43307 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSR1P43307 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.79□□□□□ -1.48
SSR1P43307 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.79□□□□□ -1.48
SSR1P43307 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSR1P43307 AC023490.2-201ENST00000359859 470 ntBASIC5.79□□□□□ -1.48
SSR1P43307 RNA5SP223-201ENST00000365174 120 ntBASIC5.79□□□□□ -1.48
SSR1P43307 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SSR1P43307 LYPLA1P3-201ENST00000402650 695 ntBASIC5.79□□□□□ -1.48
SSR1P43307 OR2AT2P-201ENST00000413438 905 ntBASIC5.79□□□□□ -1.48
SSR1P43307 AL590609.2-201ENST00000421430 368 ntBASIC5.79□□□□□ -1.48
SSR1P43307 AC009784.1-201ENST00000426484 460 ntBASIC5.79□□□□□ -1.48
SSR1P43307 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.79□□□□□ -1.48
SSR1P43307 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.79□□□□□ -1.48
SSR1P43307 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.79□□□□□ -1.48
SSR1P43307 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.79□□□□□ -1.48
SSR1P43307 AC005297.1-201ENST00000444765 862 ntBASIC5.79□□□□□ -1.48
SSR1P43307 EEF1B2P6-201ENST00000445713 673 ntBASIC5.79□□□□□ -1.48
SSR1P43307 AZGP1P2-201ENST00000454506 345 ntBASIC5.79□□□□□ -1.48
SSR1P43307 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.79□□□□□ -1.48
SSR1P43307 UBFD1P1-201ENST00000473259 814 ntBASIC5.79□□□□□ -1.48
SSR1P43307 UBA52P3-201ENST00000491303 382 ntBASIC5.79□□□□□ -1.48
SSR1P43307 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.79□□□□□ -1.48
SSR1P43307 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.79□□□□□ -1.48
SSR1P43307 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.79□□□□□ -1.48
SSR1P43307 AC079064.1-201ENST00000528365 362 ntBASIC5.79□□□□□ -1.48
SSR1P43307 AC005363.1-201ENST00000530779 351 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms