Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC8P31273 AC009127.1-201ENST00000467090 155 ntBASIC5.9□□□□□ -1.46
HOXC8P31273 AC092754.1-201ENST00000472975 479 ntBASIC5.9□□□□□ -1.46
HOXC8P31273 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC8P31273 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.9□□□□□ -1.46
HOXC8P31273 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC8P31273 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.9□□□□□ -1.46
HOXC8P31273 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.9□□□□□ -1.46
HOXC8P31273 AC239803.2-201ENST00000610161 430 ntBASIC5.9□□□□□ -1.46
HOXC8P31273 AP001784.1-201ENST00000624107 428 ntBASIC5.9□□□□□ -1.46
HOXC8P31273 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC8P31273 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC8P31273 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC8P31273 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC8P31273 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC8P31273 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.47
HOXC8P31273 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
HOXC8P31273 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC8P31273 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HOXC8P31273 MSL3P1-202ENST00000440028 1468 ntBASIC5.9□□□□□ -1.47
HOXC8P31273 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
HOXC8P31273 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HOXC8P31273 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.89□□□□□ -1.47
HOXC8P31273 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC8P31273 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
HOXC8P31273 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.89□□□□□ -1.47
HOXC8P31273 SNURFL-201ENST00000309296 343 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC8P31273 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC8P31273 RN7SKP126-201ENST00000411143 300 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 SEPT7P8-201ENST00000413308 775 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC8P31273 AC093162.1-201ENST00000419682 124 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 EI24P4-201ENST00000423683 1078 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC8P31273 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC8P31273 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC8P31273 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC8P31273 SNRPFP2-201ENST00000440710 251 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 LINC02210-201ENST00000444561 288 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC8P31273 DNAJB5P1-201ENST00000454004 806 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 RN7SL423P-201ENST00000486202 304 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 AGGF1P3-201ENST00000493675 1213 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 ST13P12-201ENST00000508958 1094 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.89□□□□□ -1.47
HOXC8P31273 AC091912.1-201ENST00000511351 248 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC8P31273 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.89□□□□□ -1.47
HOXC8P31273 MIR3908-201ENST00000579798 126 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 AL590410.1-201ENST00000617925 333 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 AL445528.2-201ENST00000620582 470 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HOXC8P31273 AL117378.2-201ENST00000622916 1337 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC8P31273 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.89□□□□□ -1.47
HOXC8P31273 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC8P31273 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
HOXC8P31273 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
HOXC8P31273 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HOXC8P31273 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HOXC8P31273 AC144833.1-201ENST00000567953 4089 ntBASIC5.89□□□□□ -1.47
HOXC8P31273 MTND5P23-201ENST00000430812 1655 ntBASIC5.88□□□□□ -1.47
HOXC8P31273 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC8P31273 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
HOXC8P31273 AL121839.2-201ENST00000565058 6943 ntBASIC5.88□□□□□ -1.47
HOXC8P31273 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXC8P31273 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HOXC8P31273 AL078599.1-201ENST00000402075 293 ntBASIC5.88□□□□□ -1.47
HOXC8P31273 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.88□□□□□ -1.47
HOXC8P31273 AC211486.3-201ENST00000412694 621 ntBASIC5.88□□□□□ -1.47
HOXC8P31273 ARAFP1-201ENST00000422172 605 ntBASIC5.88□□□□□ -1.47
HOXC8P31273 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.88□□□□□ -1.47
HOXC8P31273 RBMY2QP-201ENST00000429799 1147 ntBASIC5.88□□□□□ -1.47
HOXC8P31273 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC8P31273 FABP7P2-201ENST00000429946 379 ntBASIC5.88□□□□□ -1.47
HOXC8P31273 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC8P31273 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC8P31273 H2AFZP6-201ENST00000444403 394 ntBASIC5.88□□□□□ -1.47
HOXC8P31273 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC8P31273 RNU6-551P-201ENST00000516661 103 ntBASIC5.88□□□□□ -1.47
HOXC8P31273 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC8P31273 AP001804.2-201ENST00000533932 910 ntBASIC5.88□□□□□ -1.47
HOXC8P31273 AP002373.2-201ENST00000541631 1060 ntBASIC5.88□□□□□ -1.47
HOXC8P31273 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.88□□□□□ -1.47
HOXC8P31273 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
HOXC8P31273 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC8P31273 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC8P31273 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
HOXC8P31273 AL391597.1-201ENST00000618707 694 ntBASIC5.88□□□□□ -1.47
HOXC8P31273 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
HOXC8P31273 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXC8P31273 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HOXC8P31273 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC8P31273 AL353796.1-201ENST00000561542 3241 ntBASIC5.88□□□□□ -1.47
HOXC8P31273 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC8P31273 AC034229.2-201ENST00000566945 2508 ntBASIC5.88□□□□□ -1.47
HOXC8P31273 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC8P31273 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXC8P31273 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms