Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 Y_RNA.62-201ENST00000362840 99 ntBASIC6.55□□□□□ -1.36
TM4SF1P30408 RN7SKP114-201ENST00000410327 279 ntBASIC6.55□□□□□ -1.36
TM4SF1P30408 PRPF38AP2-201ENST00000438179 851 ntBASIC6.55□□□□□ -1.36
TM4SF1P30408 AL606490.8-201ENST00000441624 319 ntBASIC6.55□□□□□ -1.36
TM4SF1P30408 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.55□□□□□ -1.36
TM4SF1P30408 RN7SL244P-201ENST00000493405 297 ntBASIC6.55□□□□□ -1.36
TM4SF1P30408 CCNHP1-201ENST00000513311 678 ntBASIC6.55□□□□□ -1.36
TM4SF1P30408 RNU6-751P-201ENST00000516382 101 ntBASIC6.55□□□□□ -1.36
TM4SF1P30408 RN7SKP260-201ENST00000516907 149 ntBASIC6.55□□□□□ -1.36
TM4SF1P30408 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.55□□□□□ -1.36
TM4SF1P30408 AL512310.9-201ENST00000553311 948 ntBASIC6.55□□□□□ -1.36
TM4SF1P30408 AP000919.1-201ENST00000582850 985 ntBASIC6.55□□□□□ -1.36
TM4SF1P30408 AC068790.7-201ENST00000602347 528 ntBASIC6.55□□□□□ -1.36
TM4SF1P30408 AP005131.7-201ENST00000610087 611 ntBASIC6.55□□□□□ -1.36
TM4SF1P30408 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.55□□□□□ -1.36
TM4SF1P30408 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.55□□□□□ -1.36
TM4SF1P30408 AP003400.3-201ENST00000624904 346 ntBASIC6.55□□□□□ -1.36
TM4SF1P30408 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
TM4SF1P30408 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TM4SF1P30408 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TM4SF1P30408 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF1P30408 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
TM4SF1P30408 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.55□□□□□ -1.36
TM4SF1P30408 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF1P30408 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF1P30408 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF1P30408 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
TM4SF1P30408 MAPK10-338ENST00000641647 3362 ntBASIC6.55□□□□□ -1.36
TM4SF1P30408 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF1P30408 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
TM4SF1P30408 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.55□□□□□ -1.36
TM4SF1P30408 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
TM4SF1P30408 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
TM4SF1P30408 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF1P30408 AL021877.2-201ENST00000624442 10684 ntBASIC6.54□□□□□ -1.36
TM4SF1P30408 SDAD1P1-202ENST00000524156 2051 ntBASIC6.54□□□□□ -1.36
TM4SF1P30408 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF1P30408 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.54□□□□□ -1.36
TM4SF1P30408 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.54□□□□□ -1.36
TM4SF1P30408 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF1P30408 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF1P30408 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.54□□□□□ -1.36
TM4SF1P30408 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TM4SF1P30408 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF1P30408 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.54□□□□□ -1.36
TM4SF1P30408 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.54□□□□□ -1.36
TM4SF1P30408 AP002530.1-201ENST00000405705 684 ntBASIC6.54□□□□□ -1.36
TM4SF1P30408 RNU2-50P-201ENST00000410494 143 ntBASIC6.54□□□□□ -1.36
TM4SF1P30408 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.54□□□□□ -1.36
TM4SF1P30408 AC117434.1-201ENST00000419971 836 ntBASIC6.54□□□□□ -1.36
TM4SF1P30408 AC112498.1-201ENST00000444401 332 ntBASIC6.54□□□□□ -1.36
TM4SF1P30408 OR52J1P-201ENST00000450596 932 ntBASIC6.54□□□□□ -1.36
TM4SF1P30408 AC079168.1-201ENST00000458741 345 ntBASIC6.54□□□□□ -1.36
TM4SF1P30408 HMGN1P8-201ENST00000463578 288 ntBASIC6.54□□□□□ -1.36
TM4SF1P30408 AC063943.1-201ENST00000465434 453 ntBASIC6.54□□□□□ -1.36
TM4SF1P30408 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
TM4SF1P30408 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.54□□□□□ -1.36
TM4SF1P30408 AC091912.1-201ENST00000511351 248 ntBASIC6.54□□□□□ -1.36
TM4SF1P30408 SCARNA20.4-201ENST00000516969 131 ntBASIC6.54□□□□□ -1.36
TM4SF1P30408 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.54□□□□□ -1.36
TM4SF1P30408 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.54□□□□□ -1.36
TM4SF1P30408 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.54□□□□□ -1.36
TM4SF1P30408 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.54□□□□□ -1.36
TM4SF1P30408 AC107980.1-201ENST00000558671 3355 ntBASIC6.54□□□□□ -1.36
TM4SF1P30408 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF1P30408 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TM4SF1P30408 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF1P30408 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.53□□□□□ -1.36
TM4SF1P30408 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF1P30408 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF1P30408 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
TM4SF1P30408 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.53□□□□□ -1.36
TM4SF1P30408 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.53□□□□□ -1.36
TM4SF1P30408 AC005225.5-201ENST00000623547 2225 ntBASIC6.53□□□□□ -1.36
TM4SF1P30408 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.53□□□□□ -1.36
TM4SF1P30408 AC090220.1-201ENST00000593078 1699 ntBASIC6.53□□□□□ -1.36
TM4SF1P30408 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF1P30408 AC068538.1-201ENST00000376856 336 ntBASIC6.53□□□□□ -1.36
TM4SF1P30408 NPM1P38-201ENST00000403835 865 ntBASIC6.53□□□□□ -1.36
TM4SF1P30408 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TM4SF1P30408 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.53□□□□□ -1.36
TM4SF1P30408 RPL5P25-201ENST00000441148 775 ntBASIC6.53□□□□□ -1.36
TM4SF1P30408 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.53□□□□□ -1.36
TM4SF1P30408 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.53□□□□□ -1.36
TM4SF1P30408 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.53□□□□□ -1.36
TM4SF1P30408 RPL23AP72-201ENST00000492447 435 ntBASIC6.53□□□□□ -1.36
TM4SF1P30408 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
TM4SF1P30408 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.53□□□□□ -1.36
TM4SF1P30408 COX6B1P5-201ENST00000509843 249 ntBASIC6.53□□□□□ -1.36
TM4SF1P30408 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.53□□□□□ -1.36
TM4SF1P30408 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.53□□□□□ -1.36
TM4SF1P30408 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.53□□□□□ -1.36
TM4SF1P30408 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
TM4SF1P30408 AC090953.1-201ENST00000604305 1092 ntBASIC6.53□□□□□ -1.36
TM4SF1P30408 AL162431.4-201ENST00000604674 411 ntBASIC6.53□□□□□ -1.36
TM4SF1P30408 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
TM4SF1P30408 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.53□□□□□ -1.36
TM4SF1P30408 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.53□□□□□ -1.36
TM4SF1P30408 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
TM4SF1P30408 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms