Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.71□□□□□ -1.18
RFX1P22670 MGAT2P2-201ENST00000427194 797 ntBASIC7.71□□□□□ -1.18
RFX1P22670 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.71□□□□□ -1.18
RFX1P22670 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC7.71□□□□□ -1.18
RFX1P22670 PUDPP2-201ENST00000431423 643 ntBASIC7.71□□□□□ -1.18
RFX1P22670 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC7.71□□□□□ -1.18
RFX1P22670 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC7.71□□□□□ -1.18
RFX1P22670 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC7.71□□□□□ -1.18
RFX1P22670 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.71□□□□□ -1.18
RFX1P22670 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RFX1P22670 RBMY3AP-201ENST00000449381 1145 ntBASIC7.71□□□□□ -1.18
RFX1P22670 AC090013.1-201ENST00000485147 480 ntBASIC7.71□□□□□ -1.18
RFX1P22670 AC079594.1-201ENST00000489757 331 ntBASIC7.71□□□□□ -1.18
RFX1P22670 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.71□□□□□ -1.18
RFX1P22670 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC7.71□□□□□ -1.18
RFX1P22670 AC091874.2-201ENST00000505889 720 ntBASIC7.71□□□□□ -1.18
RFX1P22670 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.71□□□□□ -1.18
RFX1P22670 AC116347.2-201ENST00000514912 523 ntBASIC7.71□□□□□ -1.18
RFX1P22670 IGHV3-32-201ENST00000519182 355 ntBASIC7.71□□□□□ -1.18
RFX1P22670 AP003033.2-201ENST00000528901 805 ntBASIC7.71□□□□□ -1.18
RFX1P22670 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.71□□□□□ -1.18
RFX1P22670 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.71□□□□□ -1.18
RFX1P22670 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC7.71□□□□□ -1.18
RFX1P22670 AC023827.2-201ENST00000566880 1061 ntBASIC7.71□□□□□ -1.18
RFX1P22670 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.71□□□□□ -1.18
RFX1P22670 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.71□□□□□ -1.18
RFX1P22670 ANKRD36BP2-206ENST00000575193 1245 ntBASIC7.71□□□□□ -1.18
RFX1P22670 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
RFX1P22670 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RFX1P22670 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RFX1P22670 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RFX1P22670 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RFX1P22670 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.71□□□□□ -1.18
RFX1P22670 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.71□□□□□ -1.18
RFX1P22670 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.71□□□□□ -1.18
RFX1P22670 AC095038.1-201ENST00000429248 1591 ntBASIC7.71□□□□□ -1.18
RFX1P22670 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RFX1P22670 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
RFX1P22670 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.71□□□□□ -1.18
RFX1P22670 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RFX1P22670 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
RFX1P22670 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RFX1P22670 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
RFX1P22670 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RFX1P22670 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RFX1P22670 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RFX1P22670 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
RFX1P22670 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RFX1P22670 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
RFX1P22670 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
RFX1P22670 Y_RNA.248-201ENST00000364501 109 ntBASIC7.7□□□□□ -1.18
RFX1P22670 RNU5E-4P-201ENST00000364931 120 ntBASIC7.7□□□□□ -1.18
RFX1P22670 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
RFX1P22670 RNY3P14-201ENST00000384309 102 ntBASIC7.7□□□□□ -1.18
RFX1P22670 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
RFX1P22670 RPL23AP47-201ENST00000408017 460 ntBASIC7.7□□□□□ -1.18
RFX1P22670 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.7□□□□□ -1.18
RFX1P22670 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.7□□□□□ -1.18
RFX1P22670 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC7.7□□□□□ -1.18
RFX1P22670 AL513175.1-201ENST00000431492 780 ntBASIC7.7□□□□□ -1.18
RFX1P22670 LARP1BP3-201ENST00000437229 869 ntBASIC7.7□□□□□ -1.18
RFX1P22670 AC091862.1-201ENST00000438016 1100 ntBASIC7.7□□□□□ -1.18
RFX1P22670 HMGN1P6-201ENST00000438508 291 ntBASIC7.7□□□□□ -1.18
RFX1P22670 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC7.7□□□□□ -1.18
RFX1P22670 RPL5P10-201ENST00000445207 894 ntBASIC7.7□□□□□ -1.18
RFX1P22670 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC7.7□□□□□ -1.18
RFX1P22670 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.7□□□□□ -1.18
RFX1P22670 AC002075.1-201ENST00000457396 676 ntBASIC7.7□□□□□ -1.18
RFX1P22670 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.7□□□□□ -1.18
RFX1P22670 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
RFX1P22670 RN7SL790P-201ENST00000474043 298 ntBASIC7.7□□□□□ -1.18
RFX1P22670 RPS14P8-201ENST00000478778 369 ntBASIC7.7□□□□□ -1.18
RFX1P22670 AL161747.1-201ENST00000480068 358 ntBASIC7.7□□□□□ -1.18
RFX1P22670 AC079841.1-201ENST00000481228 950 ntBASIC7.7□□□□□ -1.18
RFX1P22670 RN7SL306P-201ENST00000492941 296 ntBASIC7.7□□□□□ -1.18
RFX1P22670 AC138853.1-201ENST00000503549 823 ntBASIC7.7□□□□□ -1.18
RFX1P22670 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC7.7□□□□□ -1.18
RFX1P22670 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC7.7□□□□□ -1.18
RFX1P22670 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.7□□□□□ -1.18
RFX1P22670 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.7□□□□□ -1.18
RFX1P22670 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.7□□□□□ -1.18
RFX1P22670 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.7□□□□□ -1.18
RFX1P22670 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RFX1P22670 NDUFA3P4-201ENST00000560814 250 ntBASIC7.7□□□□□ -1.18
RFX1P22670 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.7□□□□□ -1.18
RFX1P22670 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.7□□□□□ -1.18
RFX1P22670 RN7SL426P-201ENST00000579106 295 ntBASIC7.7□□□□□ -1.18
RFX1P22670 AL157899.1-201ENST00000604110 936 ntBASIC7.7□□□□□ -1.18
RFX1P22670 AC104184.1-201ENST00000607513 721 ntBASIC7.7□□□□□ -1.18
RFX1P22670 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.7□□□□□ -1.18
RFX1P22670 U4.5-201ENST00000617137 123 ntBASIC7.7□□□□□ -1.18
RFX1P22670 AC092650.2-201ENST00000619984 902 ntBASIC7.7□□□□□ -1.18
RFX1P22670 AC012414.7-202ENST00000622705 1090 ntBASIC7.7□□□□□ -1.18
RFX1P22670 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
RFX1P22670 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.7□□□□□ -1.18
RFX1P22670 MIR665-201ENST00000635949 72 ntBASIC7.7□□□□□ -1.18
RFX1P22670 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RFX1P22670 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RFX1P22670 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.7□□□□□ -1.18
RFX1P22670 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms