Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 RN7SKP16-201ENST00000410180 299 ntBASIC5.01□□□□□ -1.61
SDC1P18827 RN7SKP286-201ENST00000410894 299 ntBASIC5.01□□□□□ -1.61
SDC1P18827 PCNPP4-201ENST00000414817 517 ntBASIC5.01□□□□□ -1.61
SDC1P18827 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.01□□□□□ -1.61
SDC1P18827 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.01□□□□□ -1.61
SDC1P18827 RPL12P18-201ENST00000437175 325 ntBASIC5.01□□□□□ -1.61
SDC1P18827 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.01□□□□□ -1.61
SDC1P18827 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDC1P18827 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.01□□□□□ -1.61
SDC1P18827 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.01□□□□□ -1.61
SDC1P18827 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.01□□□□□ -1.61
SDC1P18827 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.01□□□□□ -1.61
SDC1P18827 OR52Y1P-201ENST00000452418 828 ntBASIC5.01□□□□□ -1.61
SDC1P18827 RN7SL189P-201ENST00000468631 289 ntBASIC5.01□□□□□ -1.61
SDC1P18827 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SDC1P18827 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.01□□□□□ -1.61
SDC1P18827 EIF1P7-201ENST00000487533 337 ntBASIC5.01□□□□□ -1.61
SDC1P18827 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.01□□□□□ -1.61
SDC1P18827 MORF4L2P1-201ENST00000503761 858 ntBASIC5.01□□□□□ -1.61
SDC1P18827 CCNHP1-201ENST00000513311 678 ntBASIC5.01□□□□□ -1.61
SDC1P18827 AC006427.1-201ENST00000514359 712 ntBASIC5.01□□□□□ -1.61
SDC1P18827 RNA5SP373-201ENST00000517271 95 ntBASIC5.01□□□□□ -1.61
SDC1P18827 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.01□□□□□ -1.61
SDC1P18827 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.01□□□□□ -1.61
SDC1P18827 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SDC1P18827 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.01□□□□□ -1.61
SDC1P18827 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.01□□□□□ -1.61
SDC1P18827 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.01□□□□□ -1.61
SDC1P18827 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.01□□□□□ -1.61
SDC1P18827 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.01□□□□□ -1.61
SDC1P18827 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.01□□□□□ -1.61
SDC1P18827 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.01□□□□□ -1.61
SDC1P18827 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.01□□□□□ -1.61
SDC1P18827 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDC1P18827 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SDC1P18827 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SDC1P18827 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.01□□□□□ -1.61
SDC1P18827 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SDC1P18827 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.01□□□□□ -1.61
SDC1P18827 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5□□□□□ -1.61
SDC1P18827 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SDC1P18827 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5□□□□□ -1.61
SDC1P18827 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SDC1P18827 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SDC1P18827 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 RN7SKP124-201ENST00000364730 341 ntBASIC5□□□□□ -1.61
SDC1P18827 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5□□□□□ -1.61
SDC1P18827 MIR105-1-201ENST00000385222 81 ntBASIC5□□□□□ -1.61
SDC1P18827 AL391422.1-201ENST00000402155 436 ntBASIC5□□□□□ -1.61
SDC1P18827 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5□□□□□ -1.61
SDC1P18827 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5□□□□□ -1.61
SDC1P18827 NAP1L4P2-201ENST00000425958 899 ntBASIC5□□□□□ -1.61
SDC1P18827 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5□□□□□ -1.61
SDC1P18827 TCEA1P3-201ENST00000443005 880 ntBASIC5□□□□□ -1.61
SDC1P18827 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5□□□□□ -1.61
SDC1P18827 BX842559.2-201ENST00000451418 605 ntBASIC5□□□□□ -1.61
SDC1P18827 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5□□□□□ -1.61
SDC1P18827 MTCYBP14-201ENST00000457471 715 ntBASIC5□□□□□ -1.61
SDC1P18827 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5□□□□□ -1.61
SDC1P18827 AC100832.1-201ENST00000471945 383 ntBASIC5□□□□□ -1.61
SDC1P18827 EIF3LP3-201ENST00000495197 822 ntBASIC5□□□□□ -1.61
SDC1P18827 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5□□□□□ -1.61
SDC1P18827 IGHVII-60-1-201ENST00000519079 256 ntBASIC5□□□□□ -1.61
SDC1P18827 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5□□□□□ -1.61
SDC1P18827 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 RPL10P14-201ENST00000565265 298 ntBASIC5□□□□□ -1.61
SDC1P18827 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5□□□□□ -1.61
SDC1P18827 AC009852.2-201ENST00000567898 485 ntBASIC5□□□□□ -1.61
SDC1P18827 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5□□□□□ -1.61
SDC1P18827 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5□□□□□ -1.61
SDC1P18827 AC104695.2-201ENST00000605056 775 ntBASIC5□□□□□ -1.61
SDC1P18827 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5□□□□□ -1.61
SDC1P18827 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5□□□□□ -1.61
SDC1P18827 MIR8080-201ENST00000622224 89 ntBASIC5□□□□□ -1.61
SDC1P18827 AC002044.3-201ENST00000623314 541 ntBASIC5□□□□□ -1.61
SDC1P18827 AC138965.3-201ENST00000623875 498 ntBASIC5□□□□□ -1.61
SDC1P18827 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
SDC1P18827 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5□□□□□ -1.61
SDC1P18827 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SDC1P18827 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 AC112198.2-201ENST00000426589 6996 ntBASIC5□□□□□ -1.61
SDC1P18827 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SDC1P18827 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SDC1P18827 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SDC1P18827 AC004817.4-201ENST00000602396 3625 ntBASIC4.99□□□□□ -1.61
SDC1P18827 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SDC1P18827 MAPK10-338ENST00000641647 3362 ntBASIC4.99□□□□□ -1.61
SDC1P18827 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms