Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SNORA70.13-201ENST00000516116 138 ntBASIC8.69□□□□□ -1.02
CFTRP13569 MIR1254-2-201ENST00000579553 63 ntBASIC8.69□□□□□ -1.02
CFTRP13569 MIR6853-201ENST00000619642 74 ntBASIC8.69□□□□□ -1.02
CFTRP13569 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
CFTRP13569 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.69□□□□□ -1.02
CFTRP13569 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC8.69□□□□□ -1.02
CFTRP13569 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CFTRP13569 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CFTRP13569 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CFTRP13569 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CFTRP13569 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.68□□□□□ -1.02
CFTRP13569 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC8.68□□□□□ -1.02
CFTRP13569 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
CFTRP13569 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
CFTRP13569 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CFTRP13569 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC8.68□□□□□ -1.02
CFTRP13569 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC8.68□□□□□ -1.02
CFTRP13569 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CFTRP13569 U3.30-201ENST00000391308 210 ntBASIC8.68□□□□□ -1.02
CFTRP13569 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC8.68□□□□□ -1.02
CFTRP13569 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC8.68□□□□□ -1.02
CFTRP13569 AC010733.1-201ENST00000451515 401 ntBASIC8.68□□□□□ -1.02
CFTRP13569 AC013356.1-201ENST00000489027 564 ntBASIC8.68□□□□□ -1.02
CFTRP13569 SEPT10P1-201ENST00000517342 1162 ntBASIC8.68□□□□□ -1.02
CFTRP13569 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC8.68□□□□□ -1.02
CFTRP13569 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
CFTRP13569 AL139041.1-201ENST00000605480 610 ntBASIC8.68□□□□□ -1.02
CFTRP13569 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CFTRP13569 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.68□□□□□ -1.02
CFTRP13569 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.68□□□□□ -1.02
CFTRP13569 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC8.67□□□□□ -1.02
CFTRP13569 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CFTRP13569 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
CFTRP13569 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
CFTRP13569 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
CFTRP13569 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC8.67□□□□□ -1.02
CFTRP13569 RN7SKP106-201ENST00000410832 272 ntBASIC8.67□□□□□ -1.02
CFTRP13569 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC8.67□□□□□ -1.02
CFTRP13569 CENPIP1-201ENST00000425713 902 ntBASIC8.67□□□□□ -1.02
CFTRP13569 NDUFB4P8-201ENST00000435351 367 ntBASIC8.67□□□□□ -1.02
CFTRP13569 AC073143.1-201ENST00000436316 395 ntBASIC8.67□□□□□ -1.02
CFTRP13569 AC239367.2-201ENST00000447309 705 ntBASIC8.67□□□□□ -1.02
CFTRP13569 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC8.67□□□□□ -1.02
CFTRP13569 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
CFTRP13569 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC8.67□□□□□ -1.02
CFTRP13569 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CFTRP13569 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC8.67□□□□□ -1.02
CFTRP13569 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC8.67□□□□□ -1.02
CFTRP13569 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CFTRP13569 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
CFTRP13569 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CFTRP13569 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CFTRP13569 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CFTRP13569 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CFTRP13569 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
CFTRP13569 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
CFTRP13569 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CFTRP13569 RNA5SP447-201ENST00000363749 119 ntBASIC8.66□□□□□ -1.02
CFTRP13569 SNORD113.2-201ENST00000364166 89 ntBASIC8.66□□□□□ -1.02
CFTRP13569 U3.28-201ENST00000391249 210 ntBASIC8.66□□□□□ -1.02
CFTRP13569 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC8.66□□□□□ -1.02
CFTRP13569 RN7SL189P-201ENST00000468631 289 ntBASIC8.66□□□□□ -1.02
CFTRP13569 AC022360.1-201ENST00000521058 340 ntBASIC8.66□□□□□ -1.02
CFTRP13569 AC019322.1-201ENST00000571869 389 ntBASIC8.66□□□□□ -1.02
CFTRP13569 RPL12P25-202ENST00000598100 674 ntBASIC8.66□□□□□ -1.02
CFTRP13569 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CFTRP13569 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CFTRP13569 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
CFTRP13569 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.66□□□□□ -1.02
CFTRP13569 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CFTRP13569 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.66□□□□□ -1.02
CFTRP13569 LINC02035-201ENST00000610128 5476 ntBASIC8.66□□□□□ -1.02
CFTRP13569 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC8.66□□□□□ -1.02
CFTRP13569 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
CFTRP13569 AC005225.5-201ENST00000623547 2225 ntBASIC8.65□□□□□ -1.02
CFTRP13569 U3.10-201ENST00000364459 214 ntBASIC8.65□□□□□ -1.02
CFTRP13569 RN7SKP153-201ENST00000365026 316 ntBASIC8.65□□□□□ -1.02
CFTRP13569 SNORA2.3-201ENST00000383920 135 ntBASIC8.65□□□□□ -1.02
CFTRP13569 SNX10-203ENST00000409367 746 ntTSL 5 BASIC8.65□□□□□ -1.02
CFTRP13569 RPL17P36-201ENST00000420302 549 ntBASIC8.65□□□□□ -1.02
CFTRP13569 KCTD10P1-201ENST00000434203 625 ntBASIC8.65□□□□□ -1.02
CFTRP13569 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC8.65□□□□□ -1.02
CFTRP13569 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC8.65□□□□□ -1.02
CFTRP13569 AC098976.1-201ENST00000513014 541 ntBASIC8.65□□□□□ -1.02
CFTRP13569 AC068831.4-201ENST00000556118 109 ntBASIC8.65□□□□□ -1.02
CFTRP13569 RNF138P2-201ENST00000603490 592 ntBASIC8.65□□□□□ -1.02
CFTRP13569 IPO5-229ENST00000631030 192 ntTSL 5 BASIC8.65□□□□□ -1.02
CFTRP13569 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC8.65□□□□□ -1.02
CFTRP13569 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
CFTRP13569 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CFTRP13569 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CFTRP13569 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC8.65□□□□□ -1.03
CFTRP13569 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC8.65□□□□□ -1.03
CFTRP13569 BRD7P6-201ENST00000431406 1860 ntBASIC8.65□□□□□ -1.03
CFTRP13569 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CFTRP13569 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CFTRP13569 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CFTRP13569 SNORA57.1-201ENST00000391227 145 ntBASIC8.64□□□□□ -1.03
CFTRP13569 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC8.64□□□□□ -1.03
CFTRP13569 RN7SL443P-201ENST00000464331 290 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms