Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.87□□□□□ -1.63
SPTA1P02549 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC4.87□□□□□ -1.63
SPTA1P02549 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC4.87□□□□□ -1.63
SPTA1P02549 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.87□□□□□ -1.63
SPTA1P02549 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.87□□□□□ -1.63
SPTA1P02549 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.87□□□□□ -1.63
SPTA1P02549 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.87□□□□□ -1.63
SPTA1P02549 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SPTA1P02549 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.86□□□□□ -1.63
SPTA1P02549 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.86□□□□□ -1.63
SPTA1P02549 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SPTA1P02549 AL158073.1-201ENST00000426848 1104 ntBASIC4.86□□□□□ -1.63
SPTA1P02549 AL365220.1-201ENST00000432923 399 ntBASIC4.86□□□□□ -1.63
SPTA1P02549 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.86□□□□□ -1.63
SPTA1P02549 SNORA84-201ENST00000459229 133 ntBASIC4.86□□□□□ -1.63
SPTA1P02549 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.86□□□□□ -1.63
SPTA1P02549 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.86□□□□□ -1.63
SPTA1P02549 RN7SKP92-201ENST00000517266 244 ntBASIC4.86□□□□□ -1.63
SPTA1P02549 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
SPTA1P02549 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.86□□□□□ -1.63
SPTA1P02549 AC093227.2-201ENST00000589357 285 ntBASIC4.86□□□□□ -1.63
SPTA1P02549 AP000769.2-201ENST00000602344 396 ntBASIC4.86□□□□□ -1.63
SPTA1P02549 AC099494.2-201ENST00000623371 978 ntBASIC4.86□□□□□ -1.63
SPTA1P02549 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.86□□□□□ -1.63
SPTA1P02549 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.86□□□□□ -1.63
SPTA1P02549 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.86□□□□□ -1.63
SPTA1P02549 CASC19-205ENST00000641013 1411 ntBASIC4.86□□□□□ -1.63
SPTA1P02549 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC4.86□□□□□ -1.63
SPTA1P02549 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.86□□□□□ -1.63
SPTA1P02549 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.86□□□□□ -1.63
SPTA1P02549 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.86□□□□□ -1.63
SPTA1P02549 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.86□□□□□ -1.63
SPTA1P02549 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.86□□□□□ -1.63
SPTA1P02549 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.86□□□□□ -1.63
SPTA1P02549 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.86□□□□□ -1.63
SPTA1P02549 AP002812.1-201ENST00000495378 474 ntBASIC4.86□□□□□ -1.63
SPTA1P02549 AC093720.1-201ENST00000505681 714 ntBASIC4.86□□□□□ -1.63
SPTA1P02549 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.86□□□□□ -1.63
SPTA1P02549 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC4.86□□□□□ -1.63
SPTA1P02549 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.86□□□□□ -1.63
SPTA1P02549 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.86□□□□□ -1.63
SPTA1P02549 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.86□□□□□ -1.63
SPTA1P02549 AC127381.1-201ENST00000555979 939 ntBASIC4.86□□□□□ -1.63
SPTA1P02549 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.86□□□□□ -1.63
SPTA1P02549 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.86□□□□□ -1.63
SPTA1P02549 OR8B1P-202ENST00000641132 1178 ntBASIC4.86□□□□□ -1.63
SPTA1P02549 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
SPTA1P02549 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SPTA1P02549 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SPTA1P02549 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SPTA1P02549 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SPTA1P02549 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SPTA1P02549 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.85□□□□□ -1.63
SPTA1P02549 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SPTA1P02549 THAP12P4-201ENST00000528321 2266 ntBASIC4.85□□□□□ -1.63
SPTA1P02549 RNA5SP387-201ENST00000364226 106 ntBASIC4.85□□□□□ -1.63
SPTA1P02549 MIR551A-201ENST00000385042 96 ntBASIC4.85□□□□□ -1.63
SPTA1P02549 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.85□□□□□ -1.63
SPTA1P02549 RPL7P57-201ENST00000423238 740 ntBASIC4.85□□□□□ -1.63
SPTA1P02549 MGAT2P2-201ENST00000427194 797 ntBASIC4.85□□□□□ -1.63
SPTA1P02549 AC093414.1-201ENST00000434712 514 ntBASIC4.85□□□□□ -1.63
SPTA1P02549 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.85□□□□□ -1.63
SPTA1P02549 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC4.85□□□□□ -1.63
SPTA1P02549 EIF2S2P2-201ENST00000447161 982 ntBASIC4.85□□□□□ -1.63
SPTA1P02549 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.85□□□□□ -1.63
SPTA1P02549 AC111000.3-201ENST00000508057 576 ntBASIC4.85□□□□□ -1.63
SPTA1P02549 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SPTA1P02549 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SPTA1P02549 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.85□□□□□ -1.63
SPTA1P02549 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.85□□□□□ -1.63
SPTA1P02549 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SPTA1P02549 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.85□□□□□ -1.63
SPTA1P02549 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SPTA1P02549 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SPTA1P02549 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SPTA1P02549 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SPTA1P02549 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.85□□□□□ -1.63
SPTA1P02549 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SPTA1P02549 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms