Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL4A1P02462 AL731532.1-201ENST00000623972 4236 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A1P02462 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
COL4A1P02462 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A1P02462 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A1P02462 SNORA70.10-201ENST00000384515 134 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 HYALP1-201ENST00000417674 1279 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.14□□□□□ -1.43
COL4A1P02462 SCAND3P1-201ENST00000439854 1060 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 AC023271.1-201ENST00000445936 1090 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 RPS24P16-201ENST00000497294 392 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.14□□□□□ -1.43
COL4A1P02462 AC025674.1-201ENST00000507074 324 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 AC079414.3-201ENST00000612986 1090 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 AC087821.1-201ENST00000623639 567 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A1P02462 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.14□□□□□ -1.43
COL4A1P02462 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A1P02462 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A1P02462 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A1P02462 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A1P02462 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A1P02462 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A1P02462 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A1P02462 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
COL4A1P02462 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
COL4A1P02462 SDAD1P1-202ENST00000524156 2051 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 AC004817.4-201ENST00000602396 3625 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A1P02462 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A1P02462 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A1P02462 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A1P02462 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A1P02462 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A1P02462 AC119751.6-201ENST00000416712 186 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 AC004690.1-201ENST00000418216 328 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 AC138761.5-201ENST00000433967 325 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 AL359265.1-201ENST00000440296 795 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 HMGB1P4-201ENST00000455362 567 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 AL356390.1-201ENST00000455684 397 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.14□□□□□ -1.43
COL4A1P02462 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.14□□□□□ -1.43
COL4A1P02462 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.14□□□□□ -1.43
COL4A1P02462 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.14□□□□□ -1.43
COL4A1P02462 RN7SL290P-201ENST00000578661 300 ntBASIC6.14□□□□□ -1.43
COL4A1P02462 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A1P02462 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL4A1P02462 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A1P02462 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A1P02462 AC018765.1-201ENST00000623357 3446 ntBASIC6.13□□□□□ -1.43
COL4A1P02462 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COL4A1P02462 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
COL4A1P02462 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A1P02462 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A1P02462 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.13□□□□□ -1.43
COL4A1P02462 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A1P02462 AC093829.1-201ENST00000506662 1618 ntBASIC6.13□□□□□ -1.43
COL4A1P02462 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A1P02462 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A1P02462 RNA5SP345-201ENST00000410646 108 ntBASIC6.13□□□□□ -1.43
COL4A1P02462 AL359265.2-201ENST00000434367 631 ntBASIC6.13□□□□□ -1.43
COL4A1P02462 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.13□□□□□ -1.43
COL4A1P02462 CEACAMP6-201ENST00000452007 574 ntBASIC6.13□□□□□ -1.43
COL4A1P02462 RN7SL319P-201ENST00000480656 221 ntBASIC6.13□□□□□ -1.43
COL4A1P02462 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A1P02462 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A1P02462 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A1P02462 AC093388.1-201ENST00000609166 430 ntBASIC6.13□□□□□ -1.43
COL4A1P02462 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A1P02462 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.13□□□□□ -1.43
COL4A1P02462 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COL4A1P02462 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL4A1P02462 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.13□□□□□ -1.43
COL4A1P02462 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.13□□□□□ -1.43
COL4A1P02462 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A1P02462 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
COL4A1P02462 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A1P02462 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A1P02462 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
COL4A1P02462 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A1P02462 MTHFD2P5-201ENST00000320415 844 ntBASIC6.12□□□□□ -1.43
COL4A1P02462 AL049697.2-201ENST00000403708 294 ntBASIC6.12□□□□□ -1.43
COL4A1P02462 AL035079.1-201ENST00000405210 287 ntBASIC6.12□□□□□ -1.43
COL4A1P02462 TBCAP2-201ENST00000416175 326 ntBASIC6.12□□□□□ -1.43
COL4A1P02462 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.12□□□□□ -1.43
COL4A1P02462 OR52A4P-201ENST00000472867 958 ntBASIC6.12□□□□□ -1.43
COL4A1P02462 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.12□□□□□ -1.43
COL4A1P02462 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.12□□□□□ -1.43
COL4A1P02462 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.12□□□□□ -1.43
COL4A1P02462 AC233699.1-201ENST00000569955 1168 ntBASIC6.12□□□□□ -1.43
COL4A1P02462 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.12□□□□□ -1.43
COL4A1P02462 MTCYBP13-201ENST00000578634 1093 ntBASIC6.12□□□□□ -1.43
COL4A1P02462 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.12□□□□□ -1.43
COL4A1P02462 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
COL4A1P02462 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL4A1P02462 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.12□□□□□ -1.43
COL4A1P02462 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL4A1P02462 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms