Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFBP01127 AC097063.1-201ENST00000426714 1797 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFBP01127 AL451142.1-201ENST00000375867 775 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 AC068538.1-201ENST00000376856 336 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 RNU6-729P-201ENST00000384399 107 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.55□□□□□ -1.52
PDGFBP01127 RN7SKP151-201ENST00000410230 316 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 AL133482.1-201ENST00000415988 498 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 MGAT2P2-201ENST00000427194 797 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 DNAJC19P7-201ENST00000428811 344 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 AL731534.1-201ENST00000434711 269 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFBP01127 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFBP01127 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFBP01127 SEPT7P3-201ENST00000455017 621 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.55□□□□□ -1.52
PDGFBP01127 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFBP01127 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.55□□□□□ -1.52
PDGFBP01127 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.55□□□□□ -1.52
PDGFBP01127 AC025857.1-201ENST00000525252 377 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.55□□□□□ -1.52
PDGFBP01127 AC011270.1-201ENST00000558606 583 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFBP01127 AC060766.1-201ENST00000590824 627 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFBP01127 RNF138P2-201ENST00000603490 592 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 AC004890.3-201ENST00000605566 1095 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 AL356608.1-201ENST00000610034 820 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFBP01127 AC074101.1-201ENST00000637861 241 ntBASIC5.55□□□□□ -1.52
PDGFBP01127 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
PDGFBP01127 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFBP01127 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFBP01127 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFBP01127 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.55□□□□□ -1.52
PDGFBP01127 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFBP01127 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFBP01127 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFBP01127 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.55□□□□□ -1.52
PDGFBP01127 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.55□□□□□ -1.52
PDGFBP01127 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.55□□□□□ -1.52
PDGFBP01127 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFBP01127 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFBP01127 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFBP01127 AC107021.2-201ENST00000567714 2095 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFBP01127 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFBP01127 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.54□□□□□ -1.52
PDGFBP01127 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFBP01127 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFBP01127 SNURFL-201ENST00000309296 343 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFBP01127 RNU6-697P-201ENST00000363348 107 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFBP01127 SNORA79B-201ENST00000410557 148 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 GJA6P-201ENST00000415117 1042 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.54□□□□□ -1.52
PDGFBP01127 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFBP01127 OR6C72P-201ENST00000451403 892 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 AGGF1P3-201ENST00000493675 1213 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFBP01127 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.54□□□□□ -1.52
PDGFBP01127 RPS4XP20-201ENST00000505751 772 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
PDGFBP01127 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.54□□□□□ -1.52
PDGFBP01127 SCARNA16.4-201ENST00000516956 187 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFBP01127 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFBP01127 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFBP01127 AC024940.3-201ENST00000538551 316 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFBP01127 AGGF1P7-201ENST00000562369 913 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFBP01127 MIR4270-201ENST00000581799 70 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.54□□□□□ -1.52
PDGFBP01127 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFBP01127 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.54□□□□□ -1.52
PDGFBP01127 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFBP01127 NF1P10-201ENST00000613227 742 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFBP01127 AC068870.3-201ENST00000625077 2536 ntBASIC5.54□□□□□ -1.52
PDGFBP01127 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDGFBP01127 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFBP01127 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFBP01127 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFBP01127 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFBP01127 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.54□□□□□ -1.52
PDGFBP01127 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFBP01127 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PDGFBP01127 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
PDGFBP01127 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFBP01127 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDGFBP01127 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.53□□□□□ -1.52
PDGFBP01127 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PDGFBP01127 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.53□□□□□ -1.52
PDGFBP01127 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PDGFBP01127 RN7SKP149-201ENST00000363008 344 ntBASIC5.53□□□□□ -1.52
PDGFBP01127 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms