Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MTCO1P45-201ENST00000431457 267 ntBASIC5.21□□□□□ -1.58
SNX3O60493 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX3O60493 RPS26P4-201ENST00000431743 355 ntBASIC5.21□□□□□ -1.58
SNX3O60493 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX3O60493 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SNX3O60493 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX3O60493 SNRPFP2-201ENST00000440710 251 ntBASIC5.21□□□□□ -1.58
SNX3O60493 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX3O60493 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX3O60493 AL445433.1-201ENST00000457507 257 ntBASIC5.21□□□□□ -1.58
SNX3O60493 AC108161.1-201ENST00000461060 402 ntBASIC5.21□□□□□ -1.58
SNX3O60493 AC112206.1-201ENST00000468416 477 ntBASIC5.21□□□□□ -1.58
SNX3O60493 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SNX3O60493 AC025181.1-201ENST00000477507 416 ntBASIC5.21□□□□□ -1.58
SNX3O60493 RN7SL193P-201ENST00000491708 276 ntBASIC5.21□□□□□ -1.58
SNX3O60493 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX3O60493 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX3O60493 AC131935.1-201ENST00000524621 333 ntBASIC5.21□□□□□ -1.58
SNX3O60493 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX3O60493 AP003168.1-201ENST00000530091 307 ntBASIC5.21□□□□□ -1.58
SNX3O60493 AC008147.3-201ENST00000548666 354 ntBASIC5.21□□□□□ -1.58
SNX3O60493 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX3O60493 SETP1-201ENST00000556014 845 ntBASIC5.21□□□□□ -1.58
SNX3O60493 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX3O60493 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX3O60493 RNF138P2-201ENST00000603490 592 ntBASIC5.21□□□□□ -1.58
SNX3O60493 AL162431.4-201ENST00000604674 411 ntBASIC5.21□□□□□ -1.58
SNX3O60493 AC012213.4-201ENST00000606457 354 ntBASIC5.21□□□□□ -1.58
SNX3O60493 AC015922.4-201ENST00000612568 690 ntBASIC5.21□□□□□ -1.58
SNX3O60493 AC245014.3-201ENST00000618589 347 ntBASIC5.21□□□□□ -1.58
SNX3O60493 HPVC1-201ENST00000629899 1198 ntBASIC5.21□□□□□ -1.58
SNX3O60493 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX3O60493 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SNX3O60493 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
SNX3O60493 AC116158.1-201ENST00000560231 2129 ntBASIC5.21□□□□□ -1.58
SNX3O60493 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX3O60493 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SNX3O60493 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
SNX3O60493 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX3O60493 AC008079.2-201ENST00000623543 20396 ntBASIC5.2□□□□□ -1.58
SNX3O60493 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX3O60493 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNX3O60493 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX3O60493 AC011503.2-201ENST00000594230 1500 ntBASIC5.2□□□□□ -1.58
SNX3O60493 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNX3O60493 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SNX3O60493 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNX3O60493 RNA5SP223-201ENST00000365174 120 ntBASIC5.2□□□□□ -1.58
SNX3O60493 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX3O60493 AL589655.1-201ENST00000405398 482 ntBASIC5.2□□□□□ -1.58
SNX3O60493 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX3O60493 BX119321.1-201ENST00000428912 797 ntBASIC5.2□□□□□ -1.58
SNX3O60493 AL022331.1-201ENST00000429025 477 ntBASIC5.2□□□□□ -1.58
SNX3O60493 MRPS33P4-201ENST00000434892 317 ntBASIC5.2□□□□□ -1.58
SNX3O60493 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX3O60493 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX3O60493 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX3O60493 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX3O60493 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX3O60493 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX3O60493 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX3O60493 AL356981.1-201ENST00000454879 684 ntBASIC5.2□□□□□ -1.58
SNX3O60493 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.2□□□□□ -1.58
SNX3O60493 AC087672.1-201ENST00000479876 766 ntBASIC5.2□□□□□ -1.58
SNX3O60493 ASNSP4-201ENST00000511103 447 ntBASIC5.2□□□□□ -1.58
SNX3O60493 IGKV3D-25-201ENST00000519599 235 ntBASIC5.2□□□□□ -1.58
SNX3O60493 RPL23AP53-201ENST00000521854 457 ntBASIC5.2□□□□□ -1.58
SNX3O60493 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.2□□□□□ -1.58
SNX3O60493 AP001804.2-201ENST00000533932 910 ntBASIC5.2□□□□□ -1.58
SNX3O60493 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX3O60493 AL731537.2-201ENST00000561565 951 ntBASIC5.2□□□□□ -1.58
SNX3O60493 DPPA2P4-201ENST00000563717 878 ntBASIC5.2□□□□□ -1.58
SNX3O60493 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX3O60493 FAM27E4-201ENST00000605259 342 ntBASIC5.2□□□□□ -1.58
SNX3O60493 Z95327.3-201ENST00000610385 572 ntBASIC5.2□□□□□ -1.58
SNX3O60493 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX3O60493 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX3O60493 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNX3O60493 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX3O60493 AC112255.1-201ENST00000624070 2493 ntBASIC5.2□□□□□ -1.58
SNX3O60493 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX3O60493 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX3O60493 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNX3O60493 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.2□□□□□ -1.58
SNX3O60493 Z95331.1-201ENST00000623075 23112 ntBASIC5.2□□□□□ -1.58
SNX3O60493 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNX3O60493 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNX3O60493 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
SNX3O60493 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNX3O60493 MAPK10-349ENST00000641767 3661 ntBASIC5.19□□□□□ -1.58
SNX3O60493 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNX3O60493 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.19□□□□□ -1.58
SNX3O60493 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SNX3O60493 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX3O60493 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SNX3O60493 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
SNX3O60493 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SNX3O60493 MIR551A-201ENST00000385042 96 ntBASIC5.19□□□□□ -1.58
SNX3O60493 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.19□□□□□ -1.58
SNX3O60493 RN7SKP125-201ENST00000410481 302 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms