Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 EIF1P7-201ENST00000487533 337 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 AL133372.1-201ENST00000493565 745 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMAD6O43541 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.63□□□□□ -1.51
SMAD6O43541 SCARNA21.2-201ENST00000516600 166 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.63□□□□□ -1.51
SMAD6O43541 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.63□□□□□ -1.51
SMAD6O43541 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.63□□□□□ -1.51
SMAD6O43541 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.63□□□□□ -1.51
SMAD6O43541 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.63□□□□□ -1.51
SMAD6O43541 PMS2P3-207ENST00000529061 717 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 AC007225.2-201ENST00000562529 256 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.63□□□□□ -1.51
SMAD6O43541 AC010547.7-201ENST00000570323 333 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.63□□□□□ -1.51
SMAD6O43541 GMCL1P2-201ENST00000605230 823 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.63□□□□□ -1.51
SMAD6O43541 AC006946.3-201ENST00000609791 756 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 AC084782.3-201ENST00000612282 578 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 AC010872.1-201ENST00000624225 675 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 AC000095.2-202ENST00000637415 154 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.63□□□□□ -1.51
SMAD6O43541 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.63□□□□□ -1.51
SMAD6O43541 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMAD6O43541 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.63□□□□□ -1.51
SMAD6O43541 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SMAD6O43541 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
SMAD6O43541 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMAD6O43541 AL137141.1-201ENST00000624622 4836 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMAD6O43541 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SMAD6O43541 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMAD6O43541 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
SMAD6O43541 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SMAD6O43541 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SMAD6O43541 HSPD1P7-201ENST00000447985 1686 ntBASIC5.63□□□□□ -1.51
SMAD6O43541 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMAD6O43541 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMAD6O43541 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.62□□□□□ -1.51
SMAD6O43541 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SMAD6O43541 LINC01963-201ENST00000562038 3148 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SMAD6O43541 U3.10-201ENST00000364459 214 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SMAD6O43541 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.62□□□□□ -1.51
SMAD6O43541 MIR551A-201ENST00000385042 96 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SMAD6O43541 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SMAD6O43541 AC005522.1-201ENST00000395416 346 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 RPL35AP24-201ENST00000413846 330 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 NPM1P4-201ENST00000414095 812 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMAD6O43541 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.62□□□□□ -1.51
SMAD6O43541 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.62□□□□□ -1.51
SMAD6O43541 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.62□□□□□ -1.51
SMAD6O43541 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.62□□□□□ -1.51
SMAD6O43541 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.62□□□□□ -1.51
SMAD6O43541 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.62□□□□□ -1.51
SMAD6O43541 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.62□□□□□ -1.51
SMAD6O43541 GAPDHP62-201ENST00000515313 990 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.62□□□□□ -1.51
SMAD6O43541 KCTD9P6-201ENST00000522306 950 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMAD6O43541 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.62□□□□□ -1.51
SMAD6O43541 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.62□□□□□ -1.51
SMAD6O43541 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.62□□□□□ -1.51
SMAD6O43541 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.62□□□□□ -1.51
SMAD6O43541 AP000919.1-201ENST00000582850 985 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.62□□□□□ -1.51
SMAD6O43541 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.62□□□□□ -1.51
SMAD6O43541 AC006116.5-201ENST00000591936 559 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 AC000068.2-201ENST00000608816 460 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.62□□□□□ -1.51
SMAD6O43541 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMAD6O43541 AC074140.1-201ENST00000621617 208 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.62□□□□□ -1.51
SMAD6O43541 CIR1P2-201ENST00000514821 1342 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 AL929601.4-201ENST00000613011 1341 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMAD6O43541 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SMAD6O43541 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.62□□□□□ -1.51
SMAD6O43541 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMAD6O43541 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SMAD6O43541 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMAD6O43541 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SMAD6O43541 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SMAD6O43541 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.62□□□□□ -1.51
SMAD6O43541 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.62□□□□□ -1.51
SMAD6O43541 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMAD6O43541 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMAD6O43541 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.61□□□□□ -1.51
SMAD6O43541 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMAD6O43541 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMAD6O43541 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMAD6O43541 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
SMAD6O43541 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
SMAD6O43541 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMAD6O43541 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SMAD6O43541 RN7SKP17-201ENST00000411242 351 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 Z93019.1-201ENST00000416450 973 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms