Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXN3O00409 AC090772.4-201ENST00000623599 362 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXN3O00409 AC099654.9-201ENST00000637055 678 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
FOXN3O00409 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
FOXN3O00409 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.15□□□□□ -1.43
FOXN3O00409 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.15□□□□□ -1.43
FOXN3O00409 AC020656.2-201ENST00000613291 5309 ntBASIC6.15□□□□□ -1.43
FOXN3O00409 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
FOXN3O00409 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXN3O00409 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.14□□□□□ -1.43
FOXN3O00409 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXN3O00409 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
FOXN3O00409 RNU6-481P-201ENST00000384194 107 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 MIR122-201ENST00000385044 85 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 MIR130A-201ENST00000385274 89 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
FOXN3O00409 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
FOXN3O00409 HMGB1P10-201ENST00000395823 563 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 MTATP6P31-201ENST00000406985 692 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AC096921.1-201ENST00000411661 375 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AL445183.3-201ENST00000414168 502 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 XKRYP4-201ENST00000414395 483 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXN3O00409 AC113412.1-201ENST00000425840 504 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AC013262.1-201ENST00000426710 252 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.14□□□□□ -1.43
FOXN3O00409 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXN3O00409 AC006994.1-201ENST00000438212 839 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 MTCYBP12-201ENST00000440559 1134 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXN3O00409 AL096829.2-201ENST00000446582 742 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 XKRYP5-201ENST00000449659 483 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
FOXN3O00409 RPS17P15-201ENST00000475609 349 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
FOXN3O00409 AC073610.1-201ENST00000489971 396 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AC009120.1-201ENST00000493458 473 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXN3O00409 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXN3O00409 AC114781.3-201ENST00000512083 142 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AC021678.3-201ENST00000517893 476 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.14□□□□□ -1.43
FOXN3O00409 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXN3O00409 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXN3O00409 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXN3O00409 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.14□□□□□ -1.43
FOXN3O00409 AC137627.1-201ENST00000545761 289 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AC139697.1-201ENST00000548429 745 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AC068305.2-201ENST00000550567 1205 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 DHFRP1-201ENST00000579682 559 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AC009237.12-201ENST00000604755 742 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 FAM27E4-201ENST00000605259 342 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AC027449.1-201ENST00000608890 407 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AP000864.1-201ENST00000609424 650 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AC015712.7-201ENST00000615211 635 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AC008147.4-201ENST00000617570 1204 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 AC078880.5-201ENST00000617845 421 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXN3O00409 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXN3O00409 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
FOXN3O00409 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.14□□□□□ -1.43
FOXN3O00409 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
FOXN3O00409 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
FOXN3O00409 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXN3O00409 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
FOXN3O00409 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.14□□□□□ -1.43
FOXN3O00409 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.14□□□□□ -1.43
FOXN3O00409 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
FOXN3O00409 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
FOXN3O00409 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.13□□□□□ -1.43
FOXN3O00409 AC006484.1-201ENST00000435086 1884 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 AC104964.3-201ENST00000606115 2860 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.13□□□□□ -1.43
FOXN3O00409 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.13□□□□□ -1.43
FOXN3O00409 RNU6-252P-201ENST00000363232 107 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 RN7SKP187-201ENST00000365536 330 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 SUGT1P2-201ENST00000379452 992 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.13□□□□□ -1.43
FOXN3O00409 AC066692.1-201ENST00000421721 457 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.13□□□□□ -1.43
FOXN3O00409 AKR1B10P1-201ENST00000425765 942 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.13□□□□□ -1.43
FOXN3O00409 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.13□□□□□ -1.43
FOXN3O00409 GAPDHP34-201ENST00000432112 823 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.13□□□□□ -1.43
FOXN3O00409 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.13□□□□□ -1.43
FOXN3O00409 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.13□□□□□ -1.43
FOXN3O00409 AC023512.1-201ENST00000444513 499 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.13□□□□□ -1.43
FOXN3O00409 MEMO1P4-201ENST00000453590 386 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 RPS23P2-201ENST00000463671 415 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 SETP6-201ENST00000479329 568 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 RPL32P33-201ENST00000487023 394 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.13□□□□□ -1.43
FOXN3O00409 AC074255.1-201ENST00000511259 501 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 SCARNA6.1-201ENST00000516989 238 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms