Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RN7SL308P-201ENST00000464971 297 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 RPS2P25-201ENST00000467247 580 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 RPS26P28-201ENST00000470806 348 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 RPS16P9-201ENST00000477220 427 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC093827.1-201ENST00000480094 861 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC020890.1-201ENST00000491837 504 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SKP99-201ENST00000517028 307 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 CYCSP25-201ENST00000525280 316 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 TRIM51DP-201ENST00000529746 596 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC005519.1-201ENST00000554490 601 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 VN1R67P-201ENST00000568379 913 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC110741.2-201ENST00000605278 268 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AL589743.6-201ENST00000611025 117 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 TP53TG1_2.1-201ENST00000611226 182 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AL021918.2-201ENST00000613415 194 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 uc_338.32-201ENST00000615087 172 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC109583.2-201ENST00000617367 129 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC132825.8-201ENST00000640783 297 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 SAMMSON-209ENST00000641222 1100 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 ACTR3BP5-201ENST00000448440 1479 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 ERVFRD-3-201ENST00000578561 1617 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 AC106871.1-201ENST00000568324 3102 ntBASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHKB-CPT1BH3BT56 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC010300.1-201ENST00000600671 5134 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 USP8-204ENST00000425032 3559 ntTSL 2 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 NR1H5P-201ENST00000452683 1377 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 RNA5SP52-201ENST00000362448 134 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 RGS5-202ENST00000367903 934 ntTSL 3 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 TINAG-202ENST00000370864 692 ntTSL 2 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 MIR93-201ENST00000385024 80 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC093719.1-202ENST00000392735 373 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AP000580.1-201ENST00000404439 358 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AL009179.1-201ENST00000406085 265 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 MIR1183-201ENST00000408856 89 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 IFNA12P-201ENST00000413147 571 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AL450992.3-201ENST00000413192 568 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AKR1B10P1-201ENST00000425765 942 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AL158073.1-201ENST00000426848 1104 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 TUBB4BP6-201ENST00000437576 479 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 CICP10-201ENST00000439497 198 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AL645936.1-201ENST00000441979 518 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 CXCR2P1-202ENST00000443392 1074 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 EXTL2P1-201ENST00000446218 416 ntBASIC2.8□□□□□ -1.96
CHKB-CPT1BH3BT56 AC099063.2-201ENST00000446360 662 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms