Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 USP9YP19-201ENST00000412165 485 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 REREP1Y-201ENST00000422655 198 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 REREP2Y-201ENST00000439103 200 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 MED28P3-201ENST00000444288 531 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 AC023271.1-201ENST00000445936 1090 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 AC017099.1-201ENST00000448261 1028 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SRRM4A7MD48 AL133244.1-201ENST00000456007 258 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 ACA64.1-201ENST00000459171 127 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 RN7SL168P-201ENST00000463821 279 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 RPS23P6-201ENST00000466136 431 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SRRM4A7MD48 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SRRM4A7MD48 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 AC027026.1-201ENST00000532323 742 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 AC024405.1-201ENST00000532521 1042 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 NOP56P3-201ENST00000549457 385 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 MIR6133-201ENST00000617057 108 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 AC099654.6-201ENST00000636487 512 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 AC119674.1-212ENST00000641155 993 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 SAMMSON-209ENST00000641222 1100 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 AC079298.1-201ENST00000625026 1619 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SRRM4A7MD48 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
SRRM4A7MD48 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.52□□□□□ -1.69
SRRM4A7MD48 NEPNP-201ENST00000404786 1371 ntBASIC4.52□□□□□ -1.69
SRRM4A7MD48 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 TTC39DP-201ENST00000416781 1688 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SRRM4A7MD48 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SRRM4A7MD48 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SRRM4A7MD48 ZNF90P1-201ENST00000480493 1951 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC144833.1-201ENST00000567953 4089 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SRRM4A7MD48 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SRRM4A7MD48 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SRRM4A7MD48 RN7SKP187-201ENST00000365536 330 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC245060.4-201ENST00000413293 1121 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SRRM4A7MD48 HSPE1P16-201ENST00000426640 348 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC115283.1-201ENST00000427353 400 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 BX119321.1-201ENST00000428912 797 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 AL022331.1-201ENST00000429025 477 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 RPL5P25-201ENST00000441148 775 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 HLA-DPA3-207ENST00000454398 229 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 SYT14P1-201ENST00000481459 721 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC022215.1-201ENST00000481770 362 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 ATP5LP5-201ENST00000483050 299 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 NENFP3-201ENST00000503735 313 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC025768.1-201ENST00000510057 267 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC006499.4-201ENST00000510947 694 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC060775.1-201ENST00000518241 520 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 AP002373.2-201ENST00000541631 1060 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC092121.1-201ENST00000569452 202 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 MIR4311-201ENST00000580794 100 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC135178.6-201ENST00000605314 398 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 AC005972.3-201ENST00000606304 481 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.51□□□□□ -1.69
SRRM4A7MD48 AL022394.1-201ENST00000606979 292 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 AL356274.1-201ENST00000617064 410 ntBASIC4.51□□□□□ -1.69
SRRM4A7MD48 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms