Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC187A0A096LP49 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC187A0A096LP49 VN1R87P-201ENST00000596706 487 ntBASIC5.66□□□□□ -1.5
CCDC187A0A096LP49 AC114878.2-201ENST00000604863 1251 ntBASIC5.66□□□□□ -1.5
CCDC187A0A096LP49 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC187A0A096LP49 AC079776.5-201ENST00000641920 211 ntBASIC5.66□□□□□ -1.5
CCDC187A0A096LP49 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC187A0A096LP49 AC011369.2-201ENST00000624423 1567 ntBASIC5.66□□□□□ -1.5
CCDC187A0A096LP49 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC187A0A096LP49 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC187A0A096LP49 DOCK11P1-201ENST00000553480 5932 ntBASIC5.66□□□□□ -1.5
CCDC187A0A096LP49 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CCDC187A0A096LP49 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC187A0A096LP49 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC187A0A096LP49 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC011815.2-201ENST00000618230 2021 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 RNU6-31P-201ENST00000384388 108 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 HMGB3P19-201ENST00000403971 560 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 MTCYBP7-201ENST00000419540 1134 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AL662874.1-201ENST00000426065 230 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 RPL6P5-201ENST00000445678 828 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 HMGB1P26-201ENST00000452520 628 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC104164.3-201ENST00000467363 1258 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 RPS17P11-201ENST00000474297 293 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC022215.1-201ENST00000481770 362 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC091544.1-201ENST00000484702 348 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 RPL17P2-201ENST00000491913 451 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 OR7E157P-201ENST00000494376 911 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC111000.6-201ENST00000514471 709 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 SNORA43.3-201ENST00000517240 103 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 CIR1P1-201ENST00000524055 1133 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 KCTD9P4-201ENST00000526766 1166 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AL049872.1-201ENST00000556323 322 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC119403.2-201ENST00000590960 598 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC011492.1-201ENST00000600023 315 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 BNIP3P38-201ENST00000601117 544 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC006946.3-201ENST00000609791 756 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AL445670.1-201ENST00000618889 801 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC084824.4-201ENST00000620106 731 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC092159.4-201ENST00000624944 550 ntBASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC187A0A096LP49 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC187A0A096LP49 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.65□□□□□ -1.51
CCDC187A0A096LP49 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC187A0A096LP49 PROS2P-201ENST00000474651 1951 ntBASIC5.65□□□□□ -1.51
CCDC187A0A096LP49 AC008432.1-201ENST00000615912 1320 ntBASIC5.65□□□□□ -1.51
CCDC187A0A096LP49 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC187A0A096LP49 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC187A0A096LP49 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CCDC187A0A096LP49 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 MTND5P11-201ENST00000511037 1812 ntBASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 AC079298.1-201ENST00000625026 1619 ntBASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC187A0A096LP49 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms