Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC090888.3-201ENST00000558917 509 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 RN7SL435P-201ENST00000584418 282 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 RNU6-84P-201ENST00000607737 102 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AL451049.1-201ENST00000608672 497 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 AL118522.2-201ENST00000616045 615 ntBASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DRB4X5D2U9 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 RNF19BPY-201ENST00000458209 1550 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 TMSB4XP4-201ENST00000323496 618 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 RPL21P67-201ENST00000402896 478 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 RNA5SP178-201ENST00000410380 128 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 Z93019.1-201ENST00000416450 973 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 PCNPP2-201ENST00000441651 455 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AL157385.1-201ENST00000446973 268 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AL672138.1-201ENST00000450604 1015 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AC144530.1-201ENST00000452862 555 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 RN7SL591P-201ENST00000496150 292 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AC079064.1-201ENST00000528365 362 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AC015720.2-201ENST00000567709 334 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 RNA5SP440-201ENST00000612665 119 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AC132068.1-201ENST00000623805 459 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 AL691477.1-201ENST00000624398 162 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 SOCS5P3-201ENST00000425115 1576 ntBASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DRB4X5D2U9 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 RN7SKP15-201ENST00000364742 309 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 UBBP2-201ENST00000376781 231 ntBASIC4.05□□□□□ -1.76
HLA-DRB4X5D2U9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms