Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AC093297.3-201ENST00000607056 2517 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AC114786.1-201ENST00000512892 1415 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 RNA5SP326-201ENST00000363209 110 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 RN7SKP124-201ENST00000364730 341 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 SNORA27.3-201ENST00000364937 134 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 RNU6-152P-201ENST00000384037 107 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 MIR141-201ENST00000384975 95 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 MIR620-201ENST00000385232 95 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 RPL23AP27-201ENST00000415161 451 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 MTND4LP21-201ENST00000415303 295 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AL590762.4-201ENST00000425885 253 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AC023141.6-201ENST00000429418 337 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 TMEM183AP1-205ENST00000432739 290 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AC006335.2-201ENST00000437993 330 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AC011225.1-201ENST00000457751 369 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 RNU7-157P-201ENST00000459600 66 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 RPL35AP28-201ENST00000459730 331 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AC147055.3-201ENST00000510547 851 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 MIR4311-201ENST00000580794 100 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 FAM60CP-201ENST00000591086 664 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AL445222.1-201ENST00000607259 628 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AL049539.1-201ENST00000611964 459 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 YES1P1-201ENST00000418510 1628 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 MTND4P9-201ENST00000507819 1346 ntBASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAI2Q9Y5P3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 RNU4-39P-201ENST00000362455 127 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 AC005042.1-201ENST00000393397 800 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 FAR2P2-201ENST00000413041 594 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 RNF10P1-201ENST00000418589 369 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 FAR2P4-202ENST00000425399 584 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 FAR2P1-206ENST00000449736 709 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 AC009220.1-201ENST00000451614 275 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 RN7SL72P-201ENST00000460697 269 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 AC005532.2-201ENST00000467154 373 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 CBX1P5-201ENST00000475330 559 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 RN7SL808P-201ENST00000496066 299 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 GAPDHP62-201ENST00000515313 990 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 HMGN2P6-201ENST00000551091 273 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 AC004825.1-201ENST00000555068 586 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 AL049872.1-201ENST00000556323 322 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 AP001357.1-201ENST00000586304 1053 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 FKBP1AP1-201ENST00000594588 318 ntBASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.68□□□□□ -1.5
RAI2Q9Y5P3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms