Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 AF117829.2-201ENST00000619538 361 ntBASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.39□□□□□ -1.71
RCL1Q9Y2P8 AL731566.1-201ENST00000620490 1937 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AL022393.1-201ENST00000625142 1677 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 RN7SKP74-201ENST00000362849 309 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 YWHAZP6-201ENST00000399764 738 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 DBIP1-201ENST00000401435 260 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 DSTNP5-201ENST00000427921 523 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 Z84478.1-201ENST00000438230 1219 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AL591363.1-201ENST00000450091 483 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 RNA5SP103-201ENST00000459503 118 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 RPS4XP12-201ENST00000461747 709 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 RPL29P23-201ENST00000486188 442 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 IGKV3D-25-201ENST00000519599 235 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 OR1E3-201ENST00000575608 948 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 WBP1LP12-201ENST00000604449 331 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 MIR6793-201ENST00000612376 63 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AC244517.3-201ENST00000616254 1235 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AC245014.3-201ENST00000618589 347 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AC087821.1-201ENST00000623639 567 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AC103703.1-201ENST00000634783 663 ntBASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RCL1Q9Y2P8 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 HSPD1P9-201ENST00000420325 1636 ntBASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 AL078599.1-201ENST00000402075 293 ntBASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 AC007738.1-201ENST00000413892 348 ntBASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 AK4P4-201ENST00000419465 646 ntBASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 AL121578.1-201ENST00000428051 892 ntBASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 RN7SL814P-201ENST00000487715 300 ntBASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 AC022133.1-201ENST00000490961 571 ntBASIC4.37□□□□□ -1.71
RCL1Q9Y2P8 RPS27P20-201ENST00000492051 246 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms