Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RPL9P21-201ENST00000392269 505 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 RN7SKP166-201ENST00000410812 305 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 PAICSP7-201ENST00000419829 962 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 ARL2BPP3-201ENST00000421226 480 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC000089.1-201ENST00000424559 801 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC009784.1-201ENST00000426484 460 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 MTCO2P12-201ENST00000427426 682 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 GPM6BP2-201ENST00000432046 144 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC091390.2-201ENST00000432573 374 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC104837.1-201ENST00000444644 1587 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 GPM6BP1-201ENST00000446387 144 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC146507.1-201ENST00000468335 354 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 RN7SL70P-201ENST00000478322 302 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 RN7SL170P-201ENST00000487098 295 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 TCP11X3P-202ENST00000514289 1254 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC124947.2-202ENST00000552735 133 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 FXNP1-201ENST00000555153 337 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 RPS3AP23-202ENST00000574601 686 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC015917.1-201ENST00000579654 510 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AP001429.1-201ENST00000602568 530 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AL109918.3-201ENST00000603072 338 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC019193.2-201ENST00000610012 634 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 AC017007.4-201ENST00000503353 1352 ntBASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
PDZRN3Q9UPQ7 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 CASC19-238ENST00000641523 1558 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 OR2M1P-201ENST00000318104 951 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 SNORD116.1-201ENST00000365628 92 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AL079342.2-201ENST00000403367 482 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 MIR1282-201ENST00000408865 101 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 UBTFL2-201ENST00000411859 1191 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 EEF1B2P3-201ENST00000447718 678 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 Z99127.3-201ENST00000448158 395 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 KATNBL1P6-201ENST00000453433 915 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 CDC42P1-201ENST00000456658 548 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 CCNJP2-201ENST00000457810 1163 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 RPS3AP49-201ENST00000472161 790 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AC026414.1-201ENST00000504046 698 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AC095057.1-201ENST00000507583 168 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 RNU6-358P-201ENST00000516564 75 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AC106038.2-201ENST00000520706 568 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms