Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 NAA60-237ENST00000615865 326 ntTSL 5 BASIC10.14□□□□□ -0.79
SHROOM4Q9ULL8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC10.14□□□□□ -0.79
SHROOM4Q9ULL8 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
SHROOM4Q9ULL8 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 SDAD1P1-202ENST00000524156 2051 ntBASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 NUDT19P3-201ENST00000404698 555 ntBASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 KRT8P51-201ENST00000438938 274 ntBASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 RN7SL817P-201ENST00000480777 288 ntBASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 AC091917.2-201ENST00000505002 744 ntBASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 MIR4691-201ENST00000583764 85 ntBASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 OR4F13P-202ENST00000560066 2054 ntBASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 DMD-228ENST00000541735 7080 ntTSL 5 BASIC10.13□□□□□ -0.79
SHROOM4Q9ULL8 AC132825.1-201ENST00000463573 2247 ntBASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 AC092070.2-203ENST00000598377 3644 ntBASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 AL451063.1-201ENST00000450164 1133 ntBASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 AC092647.2-201ENST00000452998 253 ntBASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 ATP5LP5-201ENST00000483050 299 ntBASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 IGKV2D-10-201ENST00000520194 281 ntBASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 AC134349.2-201ENST00000535136 910 ntBASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 AC009237.13-201ENST00000603193 276 ntBASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 OR5AQ1P-203ENST00000641818 1529 ntBASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 CASC19-221ENST00000641309 1382 ntBASIC10.12□□□□□ -0.79
SHROOM4Q9ULL8 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC10.11□□□□□ -0.79
SHROOM4Q9ULL8 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC10.11□□□□□ -0.79
SHROOM4Q9ULL8 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC10.11□□□□□ -0.79
SHROOM4Q9ULL8 NDUFA5P8-201ENST00000449019 346 ntBASIC10.11□□□□□ -0.79
SHROOM4Q9ULL8 AP001804.1-201ENST00000526868 919 ntBASIC10.11□□□□□ -0.79
SHROOM4Q9ULL8 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC10.11□□□□□ -0.79
SHROOM4Q9ULL8 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC10.11□□□□□ -0.79
SHROOM4Q9ULL8 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC10.11□□□□□ -0.79
SHROOM4Q9ULL8 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
SHROOM4Q9ULL8 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC10.11□□□□□ -0.79
SHROOM4Q9ULL8 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
SHROOM4Q9ULL8 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SHROOM4Q9ULL8 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SHROOM4Q9ULL8 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AL451142.1-201ENST00000375867 775 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 RHOT1P3-201ENST00000436571 331 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AL133372.1-201ENST00000493565 745 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AP000926.3-201ENST00000497201 299 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AC060780.2-201ENST00000589047 198 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 MIR6758-201ENST00000620653 63 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 Y_RNA.126-201ENST00000363382 111 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 DBIP1-201ENST00000401435 260 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 KNOP1P3-201ENST00000446933 426 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AC009127.1-201ENST00000467090 155 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 TRIM36-IT1-201ENST00000503723 881 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AC021106.1-201ENST00000509020 1058 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 GAPDHP62-201ENST00000515313 990 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 MIR4284-201ENST00000578924 81 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AC107993.1-201ENST00000591343 684 ntBASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SHROOM4Q9ULL8 OR5AQ1P-202ENST00000641257 1534 ntBASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms