Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 MIR3667-201ENST00000581025 74 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 AP000346.3-201ENST00000622821 210 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 AC010132.2-201ENST00000295493 1043 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 RSU1P3-201ENST00000412878 835 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 TPT1P13-201ENST00000449760 499 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 RPS29P33-201ENST00000456717 146 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 MORF4L1P3-201ENST00000525966 950 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 ATP5J2P6-201ENST00000565203 266 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 SDAD1P1-202ENST00000524156 2051 ntBASIC6.58□□□□□ -1.36
SCN11AQ9UI33 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 RN7SKP114-201ENST00000410327 279 ntBASIC6.58□□□□□ -1.36
SCN11AQ9UI33 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 RPL7AP49-201ENST00000429522 581 ntBASIC6.58□□□□□ -1.36
SCN11AQ9UI33 AL591438.1-201ENST00000433508 581 ntBASIC6.58□□□□□ -1.36
SCN11AQ9UI33 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 RPL23AP72-201ENST00000492447 435 ntBASIC6.58□□□□□ -1.36
SCN11AQ9UI33 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 AC008033.2-201ENST00000542626 177 ntBASIC6.58□□□□□ -1.36
SCN11AQ9UI33 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 AC091042.1-201ENST00000579213 173 ntBASIC6.58□□□□□ -1.36
SCN11AQ9UI33 AC011487.3-201ENST00000593607 453 ntBASIC6.58□□□□□ -1.36
SCN11AQ9UI33 AL162431.4-201ENST00000604674 411 ntBASIC6.58□□□□□ -1.36
SCN11AQ9UI33 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SCN11AQ9UI33 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC092681.1-201ENST00000297369 291 ntBASIC6.57□□□□□ -1.36
SCN11AQ9UI33 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC017019.1-201ENST00000426129 261 ntBASIC6.57□□□□□ -1.36
SCN11AQ9UI33 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 RPS29P9-201ENST00000440360 171 ntBASIC6.57□□□□□ -1.36
SCN11AQ9UI33 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 BX842559.2-201ENST00000451418 605 ntBASIC6.57□□□□□ -1.36
SCN11AQ9UI33 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC136777.2-201ENST00000522979 358 ntBASIC6.57□□□□□ -1.36
SCN11AQ9UI33 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC079064.1-201ENST00000528365 362 ntBASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC135068.12-201ENST00000637370 931 ntBASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC093829.1-201ENST00000506662 1618 ntBASIC6.57□□□□□ -1.36
SCN11AQ9UI33 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 C4BPAP2-201ENST00000428434 478 ntBASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC007559.1-201ENST00000428736 355 ntBASIC6.57□□□□□ -1.36
SCN11AQ9UI33 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC020898.1-201ENST00000474167 787 ntBASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC098976.1-201ENST00000513014 541 ntBASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.57□□□□□ -1.36
SCN11AQ9UI33 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms