Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 U3.3-201ENST00000362986 216 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 RNA5SP242-201ENST00000364171 118 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 MIR105-1-201ENST00000385222 81 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 RNU1-149P-201ENST00000390870 161 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 OOSP1-201ENST00000398992 1270 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AC009804.1-201ENST00000400949 179 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 RPL21P67-201ENST00000402896 478 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AC002069.1-201ENST00000429649 1159 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AL161722.2-201ENST00000434731 981 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 RPS11P7-201ENST00000442125 465 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 MYL12BP2-201ENST00000503948 512 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AC138832.1-201ENST00000522871 556 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AC106730.2-201ENST00000566641 540 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 FAM72A-208ENST00000607379 1139 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AC118658.2-201ENST00000618697 459 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AC005840.5-201ENST00000619166 599 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AC074101.1-201ENST00000637861 241 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 CDC27P2-201ENST00000425026 1922 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 AL121839.2-201ENST00000565058 6943 ntBASIC5.23□□□□□ -1.57
TREX1Q9NSU2 OR9K1P-201ENST00000326513 941 ntBASIC5.23□□□□□ -1.57
TREX1Q9NSU2 RNA5SP90-201ENST00000364801 99 ntBASIC5.23□□□□□ -1.57
TREX1Q9NSU2 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 RN7SKP16-201ENST00000410180 299 ntBASIC5.23□□□□□ -1.57
TREX1Q9NSU2 RNU2-22P-201ENST00000411266 212 ntBASIC5.23□□□□□ -1.57
TREX1Q9NSU2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 AC007386.1-201ENST00000455212 582 ntBASIC5.23□□□□□ -1.57
TREX1Q9NSU2 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 RNA5SP362-201ENST00000516048 118 ntBASIC5.23□□□□□ -1.57
TREX1Q9NSU2 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 CYP4F35P-202ENST00000636121 390 ntBASIC5.23□□□□□ -1.57
TREX1Q9NSU2 SAMMSON-209ENST00000641222 1100 ntBASIC5.23□□□□□ -1.57
TREX1Q9NSU2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.23□□□□□ -1.57
TREX1Q9NSU2 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.23□□□□□ -1.57
TREX1Q9NSU2 AC011503.2-201ENST00000594230 1500 ntBASIC5.23□□□□□ -1.57
TREX1Q9NSU2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.23□□□□□ -1.57
TREX1Q9NSU2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 RNA5SP223-201ENST00000365174 120 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 MIR143-201ENST00000385300 106 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 OR8V1P-201ENST00000395193 873 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 SNORA11.5-201ENST00000408163 128 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms