Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 ZNF971P-201ENST00000562068 1249 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC007346.1-201ENST00000569208 867 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AP001357.1-201ENST00000586304 1053 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC009464.1-201ENST00000615731 469 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 MIR6721-201ENST00000617181 87 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC009159.2-201ENST00000617603 606 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AL512652.1-201ENST00000619006 500 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC010435.1-201ENST00000623353 1177 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AC073488.6-201ENST00000632293 754 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 FBXL21-201ENST00000297158 1305 ntBASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TRIM54Q9BYV2 HSPD1P9-201ENST00000420325 1636 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AL355488.2-201ENST00000609909 2850 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 RNU5B-1-201ENST00000363286 116 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AL603865.2-201ENST00000401679 213 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 RN7SKP86-201ENST00000410454 332 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 RN7SKP108-201ENST00000411367 328 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AL035422.1-201ENST00000414193 397 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 PCNPP4-201ENST00000414817 517 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 HIGD1AP15-201ENST00000416198 280 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC234781.4-201ENST00000419384 244 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 NMD3P2-201ENST00000421815 761 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 FO393419.3-201ENST00000428741 282 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 RPL5P7-201ENST00000444235 813 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 RPL5P10-201ENST00000445207 894 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC092685.1-201ENST00000447960 1243 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 PPIAP7-201ENST00000454070 489 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 RPS4XP6-201ENST00000477670 797 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC012123.2-201ENST00000485809 248 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 RN7SKP288-201ENST00000516227 268 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AP000620.1-201ENST00000527147 504 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC009712.1-201ENST00000564938 316 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC027455.1-201ENST00000574104 594 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 MIR4789-201ENST00000577469 82 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC138207.8-204ENST00000579588 527 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC234772.3-201ENST00000602277 528 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC022022.2-201ENST00000602989 360 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AL450336.1-201ENST00000605180 586 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 RNU4-5P-201ENST00000607255 135 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AP004607.9-201ENST00000618202 316 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC008115.4-201ENST00000619780 775 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AP000484.1-201ENST00000620067 1252 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC006963.1-201ENST00000624003 1052 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC103703.1-201ENST00000634783 663 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 WDR95P-201ENST00000425638 1542 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 AC123769.1-201ENST00000530992 3192 ntBASIC5.88□□□□□ -1.47
TRIM54Q9BYV2 GNL2P1-201ENST00000451274 2190 ntBASIC5.87□□□□□ -1.47
TRIM54Q9BYV2 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms