Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RNU6-906P-201ENST00000384700 70 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 SNORD116-6-201ENST00000384711 96 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 HMGB1P10-201ENST00000395823 563 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC008173.1-201ENST00000418901 264 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX18Q96RF0 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX18Q96RF0 MGAT2P2-201ENST00000427194 797 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 PPIAP10-201ENST00000438675 458 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 OR10R1P-201ENST00000441524 1141 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 OR2L9P-201ENST00000444456 913 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 GAPDHP23-201ENST00000444823 993 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC092155.2-201ENST00000454675 477 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC021006.1-201ENST00000489849 553 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC105420.1-201ENST00000504389 582 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 SNX18P24-201ENST00000505249 671 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 HMGN1P16-201ENST00000508308 283 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC105313.1-201ENST00000509121 353 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 RNA5SP441-201ENST00000516809 88 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 FTH1P11-201ENST00000517577 551 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 AP004609.2-201ENST00000532177 190 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 CYB5AP5-201ENST00000549779 389 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 AL049779.3-201ENST00000557141 606 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC090888.3-201ENST00000558917 509 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC145350.1-201ENST00000567426 208 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC067838.1-201ENST00000606064 577 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 U6.48-201ENST00000618523 106 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC112694.2-201ENST00000623697 768 ntBASIC5.53□□□□□ -1.52
SNX18Q96RF0 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX18Q96RF0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX18Q96RF0 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX18Q96RF0 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX18Q96RF0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX18Q96RF0 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX18Q96RF0 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX18Q96RF0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX18Q96RF0 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 LINC01613-201ENST00000561476 2780 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 BCORP1-203ENST00000513194 5093 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 MTHFD2P5-201ENST00000320415 844 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 RNU6-1005P-201ENST00000384519 107 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 RPL5P19-201ENST00000404228 893 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 ATF1P1-201ENST00000406040 927 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 MTCYBP7-201ENST00000419540 1134 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 VN1R20P-201ENST00000425215 966 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 OSTCP5-201ENST00000425293 453 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 RPS7P14-201ENST00000426405 583 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 DSTNP5-201ENST00000427921 523 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AL136231.1-201ENST00000429407 730 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AC112492.2-201ENST00000432774 1030 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 USP9YP24-201ENST00000434374 697 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX18Q96RF0 GTF2IP14-201ENST00000441415 586 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 USP9YP17-201ENST00000444617 696 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 AL358794.1-201ENST00000445689 381 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 Z73417.1-201ENST00000447373 778 ntBASIC5.52□□□□□ -1.53
SNX18Q96RF0 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.52□□□□□ -1.53
SNX18Q96RF0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms