Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 RNA5SP308-201ENST00000362532 115 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 RNU1-5P-201ENST00000362684 144 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 RNA5SP321-201ENST00000362722 111 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 DEFB108C-201ENST00000400154 252 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AL590635.1-201ENST00000406314 586 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 CEACAMP8-201ENST00000413902 580 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 IPPKP1-201ENST00000422501 768 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 GTF2IP23-201ENST00000423746 351 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC234064.1-201ENST00000436312 247 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 RPEP4-201ENST00000437636 602 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC015983.1-201ENST00000441577 373 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AL020997.1-201ENST00000446554 349 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 RPL26P30-201ENST00000453533 435 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 RPL5P32-201ENST00000454085 879 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 PSAT1P4-201ENST00000466500 526 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 RPS26P24-201ENST00000497656 331 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC004069.2-201ENST00000505438 1114 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 MRPL57P6-201ENST00000506570 309 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC108475.1-201ENST00000507880 950 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AL390198.2-201ENST00000510553 222 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 NPM1P21-201ENST00000513394 762 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC023632.1-201ENST00000518463 375 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 KCTD9P4-201ENST00000526766 1166 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 NMNAT1P5-201ENST00000559657 841 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC027104.1-201ENST00000563702 681 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC109347.2-201ENST00000610220 349 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC120057.5-201ENST00000623840 154 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AF001550.2-201ENST00000636643 217 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 CLCA3P-203ENST00000490028 2781 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AL603750.1-201ENST00000624216 1717 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 AC020658.2-201ENST00000559030 4020 ntBASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 AC011477.1-204ENST00000623416 1325 ntBASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 AL591848.4-201ENST00000567832 3472 ntBASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 RNU6-707P-201ENST00000364647 95 ntBASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 RNU6-867P-201ENST00000364956 107 ntBASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 RNU4-31P-201ENST00000384211 141 ntBASIC6.29□□□□□ -1.4
PTCHD1Q96NR3 RNU6-1119P-201ENST00000384349 108 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms