Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC010547.6-201ENST00000571789 193 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AC012616.1-201ENST00000600294 197 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AC084373.1-201ENST00000603311 235 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 HMGB1P51-201ENST00000605166 638 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AL122125.1-201ENST00000616999 600 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 AC135068.5-201ENST00000624197 983 ntBASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PDLIM5Q96HC4 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC007342.7-201ENST00000624610 2337 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 MAPK10-338ENST00000641647 3362 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 RNU4-2-201ENST00000365668 141 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 SDHDP6-201ENST00000414693 480 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC002504.1-201ENST00000438281 691 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 SUMO2P3-201ENST00000438311 288 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 TXNP2-201ENST00000443918 295 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC021193.1-201ENST00000511607 420 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 SNORD46.2-201ENST00000516021 102 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 OR8X1P-201ENST00000534542 869 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 CD24P2-201ENST00000565486 219 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 RBM22P12-201ENST00000567098 1255 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC008115.3-201ENST00000614874 549 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC092159.4-201ENST00000624944 550 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AC092376.2-201ENST00000622621 4116 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AL353796.1-201ENST00000561542 3241 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 NXF4-202ENST00000416098 1465 ntBASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PDLIM5Q96HC4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 RNA5SP122-201ENST00000384457 108 ntBASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 DBIP1-201ENST00000401435 260 ntBASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 AL607077.1-201ENST00000401718 499 ntBASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 OR2AT2P-201ENST00000413438 905 ntBASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 HMGN2P27-201ENST00000427352 270 ntBASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 RPL7AP49-201ENST00000429522 581 ntBASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 AL591438.1-201ENST00000433508 581 ntBASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 RPL23AP19-201ENST00000436229 369 ntBASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 RPS10P18-201ENST00000442662 495 ntBASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 AC019185.1-201ENST00000442718 389 ntBASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 AC022431.1-201ENST00000450941 438 ntBASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 AC002553.2-201ENST00000453217 340 ntBASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 AL035090.1-201ENST00000454835 332 ntBASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 AC007998.1-201ENST00000474156 672 ntBASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM5Q96HC4 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms