Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RNFT1P3-201ENST00000340898 1052 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 RNA5SP241-201ENST00000391326 114 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 AL034403.1-201ENST00000399414 885 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 FAM183DP-201ENST00000421987 399 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 PCBP2P1-201ENST00000437262 977 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 AC093166.3-201ENST00000448785 303 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 AC005077.1-201ENST00000449226 375 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 AP000942.1-201ENST00000463969 747 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 AC021006.1-201ENST00000489849 553 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 RN7SL568P-201ENST00000493069 298 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 RPS27AP18-201ENST00000515536 459 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 AC079064.1-201ENST00000528365 362 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 OR1E3-201ENST00000575608 948 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 RN7SL290P-201ENST00000578661 300 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 BMS1P7-201ENST00000602440 1052 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 AC111152.1-202ENST00000635848 339 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFT1Q96AA3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 AC006206.1-201ENST00000544842 3387 ntBASIC4.94□□□□□ -1.62
RFT1Q96AA3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RFT1Q96AA3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.94□□□□□ -1.62
RFT1Q96AA3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RFT1Q96AA3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RFT1Q96AA3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFT1Q96AA3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RFT1Q96AA3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RFT1Q96AA3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 RNU6-883P-201ENST00000384597 107 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 RN7SKP86-201ENST00000410454 332 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 RN7SKP29-201ENST00000410957 272 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 AL359885.1-201ENST00000415786 903 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 MTCYBP7-201ENST00000419540 1134 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 CR848007.2-201ENST00000424918 787 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 MTND6P12-201ENST00000428247 522 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFT1Q96AA3 TMEM183AP1-205ENST00000432739 290 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 ARL4AP4-201ENST00000434170 518 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 ATP5LP2-201ENST00000440646 311 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 RPL6P30-201ENST00000443382 862 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFT1Q96AA3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RFT1Q96AA3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 RN7SL612P-201ENST00000497704 295 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 AC093225.1-201ENST00000506867 1408 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 FABP5P6-201ENST00000510588 409 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 AC098976.1-201ENST00000513014 541 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 ACTR6P1-201ENST00000514311 1104 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 IGKV3D-25-201ENST00000519599 235 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 EIF4A2P5-201ENST00000529914 499 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFT1Q96AA3 AC018552.1-201ENST00000562099 811 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFT1Q96AA3 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 AC138207.8-204ENST00000579588 527 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 MIR4776-2-201ENST00000580204 80 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 SNX6P1-201ENST00000601728 1224 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 AC124916.2-201ENST00000604416 224 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 AC005021.1-201ENST00000608730 355 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.93□□□□□ -1.62
RFT1Q96AA3 AC092266.1-201ENST00000610958 165 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 MIR6809-201ENST00000612189 116 ntBASIC4.93□□□□□ -1.62
RFT1Q96AA3 AL162233.1-201ENST00000620014 944 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms