Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 AC007618.1-201ENST00000366455 732 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 SNORD65-201ENST00000391079 73 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 GLUD1P9-201ENST00000420997 1173 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 COX6CP17-201ENST00000421389 185 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 RNFT1P2-201ENST00000443064 757 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 RPL23AP23-201ENST00000452590 471 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 FRG2FP-204ENST00000453982 852 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 RPS29P33-201ENST00000456717 146 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 RN7SL385P-201ENST00000468873 276 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 AC068587.1-201ENST00000483613 781 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 AC109462.1-201ENST00000491087 368 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 IGLV3-6-201ENST00000523937 250 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 MIR4260-201ENST00000583107 67 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 AP004372.1-201ENST00000604842 844 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 RNU6-1192P-201ENST00000612197 107 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 RNU6-489P-201ENST00000618289 107 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 AC090617.9-201ENST00000623751 147 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 AL390318.1-201ENST00000624564 687 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 AC019080.5-201ENST00000624891 757 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 AC120036.2-201ENST00000509729 1474 ntBASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SMC1BQ8NDV3 KYNUP3-201ENST00000574386 1341 ntBASIC7.02□□□□□ -1.28
SMC1BQ8NDV3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 RNU1-106P-201ENST00000384382 164 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 RNU4-27P-201ENST00000410889 139 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 OR51A6P-201ENST00000418680 1004 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 C4BPAP2-201ENST00000428434 478 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 CYCSP6-201ENST00000434498 302 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AC046176.1-201ENST00000435260 1170 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AL445928.1-201ENST00000435545 222 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AL157884.3-201ENST00000448273 1184 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 CCRL1P1-201ENST00000449542 1053 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 NDUFA5P9-201ENST00000472609 340 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 SETP6-201ENST00000479329 568 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AC090638.1-201ENST00000498296 909 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AC111000.6-201ENST00000514471 709 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 RAB9BP1-201ENST00000519581 626 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 IGLV3-30-201ENST00000524362 298 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 RNF138P2-201ENST00000603490 592 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AL139099.4-201ENST00000614802 114 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AC048344.4-201ENST00000619744 527 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 FRG1DP-201ENST00000635586 771 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 AL591848.4-201ENST00000567832 3472 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 CDY5P-201ENST00000411487 1580 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 CDY9P-201ENST00000451397 1580 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 TTC41P-205ENST00000551270 3963 ntBASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SMC1BQ8NDV3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms