Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 KARSP3-201ENST00000571212 1504 ntBASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 LINC01616-201ENST00000561816 2280 ntBASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 CYP2AC1P-201ENST00000407830 1173 ntBASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 AC011005.3-201ENST00000491624 395 ntBASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 RNA5SP143-201ENST00000516936 115 ntBASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 AL161637.1-201ENST00000622380 412 ntBASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCDC168Q8NDH2 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 UGT2B27P-201ENST00000505092 1620 ntBASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 AC069366.1-201ENST00000583159 838 ntBASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 MIR132-201ENST00000591554 101 ntBASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 AC005225.5-201ENST00000623547 2225 ntBASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 USP9YP3-201ENST00000434481 1766 ntBASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 AL122126.1-201ENST00000546905 1318 ntBASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 AL022322.2-201ENST00000624072 20397 ntBASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 MIR134-201ENST00000385258 73 ntBASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 ELOCP19-201ENST00000411919 318 ntBASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 RPL12P34-201ENST00000424532 479 ntBASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 AC091167.1-201ENST00000492017 396 ntBASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 AL445423.1-201ENST00000609941 536 ntBASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC168Q8NDH2 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 AC114876.1-201ENST00000490962 1366 ntBASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 ASNSP1-204ENST00000641977 1664 ntBASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 RNU4-39P-201ENST00000362455 127 ntBASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 SNORA70.4-201ENST00000365509 134 ntBASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 RPL12P17-201ENST00000432393 498 ntBASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 RPL23AP83-201ENST00000434984 473 ntBASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 AC006967.1-201ENST00000467608 589 ntBASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 AC083829.1-201ENST00000503756 657 ntBASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 AC009948.3-201ENST00000603415 1798 ntBASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 AL138820.1-201ENST00000617901 5305 ntBASIC4.43□□□□□ -1.7
CCDC168Q8NDH2 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms