Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 SCARNA16.4-201ENST00000516956 187 ntBASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 AC006349.1-201ENST00000555526 235 ntBASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 AL118522.2-201ENST00000616045 615 ntBASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 AC132825.8-201ENST00000640783 297 ntBASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 AC083843.3-201ENST00000623679 2186 ntBASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC50Q8IVM0 AC114947.2-201ENST00000565748 2125 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AC007342.5-201ENST00000571340 2142 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AC079298.1-201ENST00000625026 1619 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 RNU1-19P-201ENST00000363306 165 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 RNA5SP510-201ENST00000364697 99 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 UBBP2-201ENST00000376781 231 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 PCNPP4-201ENST00000414817 517 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 RPL34P3-201ENST00000421454 338 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AC012519.1-201ENST00000424588 610 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AC017019.1-201ENST00000426129 261 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 NANOGP4-201ENST00000427230 913 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AC013410.1-201ENST00000436223 1232 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AC016772.1-201ENST00000444170 1261 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AC090022.1-201ENST00000546569 311 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AC107958.1-201ENST00000556576 290 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AC108865.2-201ENST00000606881 432 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 STX3-208ENST00000641815 3236 ntBASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC50Q8IVM0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 SNORA16A-201ENST00000384342 137 ntBASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AL078599.1-201ENST00000402075 293 ntBASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 RPL10P10-201ENST00000403509 664 ntBASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 RPL12P17-201ENST00000432393 498 ntBASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AC090804.1-201ENST00000448870 490 ntBASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AC111000.5-201ENST00000506559 1178 ntBASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 NANOGNBP2-201ENST00000544753 553 ntBASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 MTCYBP13-201ENST00000578634 1093 ntBASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AC005726.4-201ENST00000582858 458 ntBASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AC109583.2-201ENST00000617367 129 ntBASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC50Q8IVM0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms