Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC28Q86X40 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC28Q86X40 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC28Q86X40 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC28Q86X40 MIR143-201ENST00000385300 106 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 RPL10P10-201ENST00000403509 664 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 RMRPP5-201ENST00000411156 267 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 RPSAP39-201ENST00000467439 883 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 AC027544.3-201ENST00000535082 757 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 AL049872.1-201ENST00000556323 322 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 RN7SL753P-201ENST00000581238 290 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 AL139407.1-201ENST00000613826 1175 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 AC008115.3-201ENST00000614874 549 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 MIR6729-201ENST00000618194 65 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 CU639417.4-201ENST00000623928 207 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC28Q86X40 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
LRRC28Q86X40 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC28Q86X40 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRRC28Q86X40 AP001642.1-201ENST00000624727 2117 ntBASIC4.78□□□□□ -1.64
LRRC28Q86X40 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC28Q86X40 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC28Q86X40 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 SMG1P7-201ENST00000565246 2704 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC28Q86X40 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC28Q86X40 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC28Q86X40 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC28Q86X40 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC28Q86X40 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 YES1P1-201ENST00000418510 1628 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC28Q86X40 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 GAPDHP24-201ENST00000328713 983 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 RNU1-146P-201ENST00000364015 165 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 RNA5SP242-201ENST00000364171 118 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 RNA5SP131-201ENST00000365452 119 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 OR6C64P-201ENST00000419708 825 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 NANOGP4-201ENST00000427230 913 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 AL121776.1-201ENST00000429337 372 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 EEF1B2P6-201ENST00000445713 673 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 OR2AF1P-201ENST00000454899 889 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 RNA5SP103-201ENST00000459503 118 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 AL136038.1-201ENST00000497246 351 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC28Q86X40 SETP1-201ENST00000556014 845 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 SNORD95-201ENST00000579879 68 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC28Q86X40 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC28Q86X40 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC28Q86X40 MT-RNR2-201ENST00000387347 1559 ntBASIC4.77□□□□□ -1.65
LRRC28Q86X40 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC28Q86X40 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRRC28Q86X40 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.77□□□□□ -1.65
LRRC28Q86X40 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRRC28Q86X40 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.76□□□□□ -1.65
LRRC28Q86X40 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.76□□□□□ -1.65
LRRC28Q86X40 MRE11P1-201ENST00000464884 2127 ntBASIC4.76□□□□□ -1.65
LRRC28Q86X40 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.76□□□□□ -1.65
LRRC28Q86X40 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.76□□□□□ -1.65
LRRC28Q86X40 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms