Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 AC087763.1-201ENST00000603391 286 ntBASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 AC133644.2-201ENST00000608142 540 ntBASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 MIR6133-201ENST00000617057 108 ntBASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
HERC4Q5GLZ8 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 MIR141-201ENST00000384975 95 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 AL589647.1-201ENST00000402485 466 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 AC009220.1-201ENST00000451614 275 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 GYG1P1-201ENST00000460864 698 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 RPS29P22-201ENST00000472363 168 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 RPS4XP1-201ENST00000482189 787 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 GOLGA5P1-201ENST00000507317 980 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 AC021106.1-201ENST00000509020 1058 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 AL671862.1-201ENST00000515851 349 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 AC079064.1-201ENST00000528365 362 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 MIR4433B-201ENST00000581329 102 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 AL118522.2-201ENST00000616045 615 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 AC132068.1-201ENST00000623805 459 ntBASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HERC4Q5GLZ8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HERC4Q5GLZ8 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
HERC4Q5GLZ8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
HERC4Q5GLZ8 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 AC005033.1-201ENST00000428904 813 ntBASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 AURKAPS1-201ENST00000451805 1212 ntBASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 AC083899.1-201ENST00000454465 3819 ntBASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 RANP1-206ENST00000455094 651 ntBASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 AC091912.1-201ENST00000511351 248 ntBASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 MIR4436B2-201ENST00000581415 91 ntBASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 MIR4436B1-201ENST00000583272 91 ntBASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 AC007786.3-201ENST00000615154 596 ntBASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 AC136428.4-201ENST00000634254 1155 ntBASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 AC073869.8-201ENST00000641806 335 ntBASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC4Q5GLZ8 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
HERC4Q5GLZ8 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
HERC4Q5GLZ8 AC112255.1-201ENST00000624070 2493 ntBASIC6.07□□□□□ -1.44
HERC4Q5GLZ8 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HERC4Q5GLZ8 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms