Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RN7SKP6-201ENST00000364795 319 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 RNA5SP131-201ENST00000365452 119 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AC007738.1-201ENST00000413892 348 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 HMGB3P24-201ENST00000433260 622 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AC073587.1-201ENST00000447093 876 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 KF459542.1-201ENST00000450908 553 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 RPL15P21-201ENST00000495592 567 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AC018797.1-201ENST00000510791 255 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 MRPS16P1-201ENST00000523462 412 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AC107918.3-201ENST00000533272 382 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 OR8G3P-201ENST00000533406 921 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 BNIP3P1-201ENST00000547295 580 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 DYNLL1P4-201ENST00000549314 266 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AC096553.1-201ENST00000605169 829 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 MIR6774-201ENST00000614651 70 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AC073869.10-201ENST00000642016 354 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 CASC19-274ENST00000642018 970 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 VN2R3P-201ENST00000422626 1412 ntBASIC4.77□□□□□ -1.65
CCDC58Q4VC31 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC58Q4VC31 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 GAPDHP42-201ENST00000406848 981 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 MIR1203-201ENST00000408812 85 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 Z68694.1-201ENST00000413929 841 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 RPL36AP10-201ENST00000421785 322 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 FAM183DP-201ENST00000421987 399 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 MTND6P18-201ENST00000439477 513 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC068491.1-201ENST00000449539 1241 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 HSD3BP3-201ENST00000514706 994 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AF186190.1-201ENST00000517470 480 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC134698.5-201ENST00000519444 336 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC116917.1-201ENST00000520558 305 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC018552.1-201ENST00000562099 811 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 DPPA2P4-201ENST00000563717 878 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AP005119.2-201ENST00000579735 1105 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 RN7SL176P-201ENST00000580352 264 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 RN7SL356P-201ENST00000582228 248 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 AC091167.5-201ENST00000605689 894 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 OR7M1P-201ENST00000608946 533 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 OR8G3P-202ENST00000641572 1255 ntBASIC4.76□□□□□ -1.65
CCDC58Q4VC31 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC58Q4VC31 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms