Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 AC009597.2-201ENST00000604659 592 ntBASIC6.39□□□□□ -1.39
RFX7Q2KHR2 AL049539.1-201ENST00000611964 459 ntBASIC6.39□□□□□ -1.39
RFX7Q2KHR2 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 AC063952.1-203ENST00000634410 658 ntBASIC6.39□□□□□ -1.39
RFX7Q2KHR2 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 AC092747.4-201ENST00000620519 1861 ntBASIC6.39□□□□□ -1.39
RFX7Q2KHR2 AC114947.2-201ENST00000565748 2125 ntBASIC6.39□□□□□ -1.39
RFX7Q2KHR2 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFX7Q2KHR2 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 HSPA8P18-201ENST00000439846 1928 ntBASIC6.38□□□□□ -1.39
RFX7Q2KHR2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 AC103591.2-201ENST00000265259 766 ntBASIC6.38□□□□□ -1.39
RFX7Q2KHR2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 NUDT19P3-201ENST00000404698 555 ntBASIC6.38□□□□□ -1.39
RFX7Q2KHR2 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 AC046176.1-201ENST00000435260 1170 ntBASIC6.38□□□□□ -1.39
RFX7Q2KHR2 REG1CP-206ENST00000447469 496 ntBASIC6.38□□□□□ -1.39
RFX7Q2KHR2 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.38□□□□□ -1.39
RFX7Q2KHR2 Z92846.1-201ENST00000456203 268 ntBASIC6.38□□□□□ -1.39
RFX7Q2KHR2 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 AC109462.1-201ENST00000491087 368 ntBASIC6.38□□□□□ -1.39
RFX7Q2KHR2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 AC016559.2-201ENST00000510759 359 ntBASIC6.38□□□□□ -1.39
RFX7Q2KHR2 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 MIR4436B2-201ENST00000581415 91 ntBASIC6.38□□□□□ -1.39
RFX7Q2KHR2 MIR4436B1-201ENST00000583272 91 ntBASIC6.38□□□□□ -1.39
RFX7Q2KHR2 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 AC112255.1-201ENST00000624070 2493 ntBASIC6.38□□□□□ -1.39
RFX7Q2KHR2 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RFX7Q2KHR2 NLRP3P1-201ENST00000622303 1785 ntBASIC6.37□□□□□ -1.39
RFX7Q2KHR2 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.37□□□□□ -1.39
RFX7Q2KHR2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RFX7Q2KHR2 MIR133A2-201ENST00000347538 102 ntBASIC6.37□□□□□ -1.39
RFX7Q2KHR2 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFX7Q2KHR2 RNU1-74P-201ENST00000384108 171 ntBASIC6.37□□□□□ -1.39
RFX7Q2KHR2 AC136624.1-201ENST00000400791 413 ntBASIC6.37□□□□□ -1.39
RFX7Q2KHR2 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.37□□□□□ -1.39
RFX7Q2KHR2 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RFX7Q2KHR2 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.37□□□□□ -1.39
RFX7Q2KHR2 PRPF38AP1-201ENST00000451976 933 ntBASIC6.37□□□□□ -1.39
RFX7Q2KHR2 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.37□□□□□ -1.39
RFX7Q2KHR2 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.37□□□□□ -1.39
RFX7Q2KHR2 EIF3KP3-201ENST00000514461 639 ntBASIC6.37□□□□□ -1.39
RFX7Q2KHR2 AC134349.2-201ENST00000535136 910 ntBASIC6.37□□□□□ -1.39
RFX7Q2KHR2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.37□□□□□ -1.39
RFX7Q2KHR2 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.37□□□□□ -1.39
RFX7Q2KHR2 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.37□□□□□ -1.39
RFX7Q2KHR2 AC011447.4-201ENST00000587562 111 ntBASIC6.37□□□□□ -1.39
RFX7Q2KHR2 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.37□□□□□ -1.39
RFX7Q2KHR2 AC011626.1-201ENST00000604710 562 ntBASIC6.37□□□□□ -1.39
RFX7Q2KHR2 AC009163.6-201ENST00000612367 342 ntBASIC6.37□□□□□ -1.39
RFX7Q2KHR2 AP002799.1-201ENST00000623552 423 ntBASIC6.37□□□□□ -1.39
RFX7Q2KHR2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFX7Q2KHR2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
RFX7Q2KHR2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
RFX7Q2KHR2 ABCC13-202ENST00000463099 3842 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 SNURFL-201ENST00000309296 343 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 OR1L6-202ENST00000373684 1044 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 MIR105-1-201ENST00000385222 81 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 RN7SKP126-201ENST00000411143 300 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 RBMY2KP-201ENST00000418221 992 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 AL161722.2-201ENST00000434731 981 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 IGLV2-34-201ENST00000490007 283 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 RN7SL591P-201ENST00000496150 292 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 AC092709.1-201ENST00000521355 1045 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 OR5AZ1P-201ENST00000527448 943 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 AC027216.1-201ENST00000577726 685 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 AC011840.5-201ENST00000582125 771 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 AL162431.4-201ENST00000604674 411 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 AL022394.1-201ENST00000606979 292 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 AP005432.2-201ENST00000608162 586 ntBASIC6.36□□□□□ -1.39
RFX7Q2KHR2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.36□□□□□ -1.39
RFX7Q2KHR2 AC026367.3-201ENST00000619032 590 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms