Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
COL16A1Q07092 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL16A1Q07092 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL16A1Q07092 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
COL16A1Q07092 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL16A1Q07092 FABP7P1-201ENST00000424004 391 ntBASIC6.9□□□□□ -1.3
COL16A1Q07092 OR10T1P-201ENST00000424327 947 ntBASIC6.9□□□□□ -1.3
COL16A1Q07092 RPL12P28-201ENST00000430852 489 ntBASIC6.9□□□□□ -1.3
COL16A1Q07092 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.9□□□□□ -1.3
COL16A1Q07092 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.9□□□□□ -1.3
COL16A1Q07092 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.9□□□□□ -1.3
COL16A1Q07092 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.9□□□□□ -1.3
COL16A1Q07092 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.9□□□□□ -1.3
COL16A1Q07092 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.9□□□□□ -1.3
COL16A1Q07092 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.9□□□□□ -1.3
COL16A1Q07092 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC6.9□□□□□ -1.3
COL16A1Q07092 CYCSP1-201ENST00000604815 315 ntBASIC6.9□□□□□ -1.3
COL16A1Q07092 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL16A1Q07092 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL16A1Q07092 AC011933.2-201ENST00000578539 2790 ntBASIC6.9□□□□□ -1.3
COL16A1Q07092 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.9□□□□□ -1.3
COL16A1Q07092 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL16A1Q07092 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL16A1Q07092 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL16A1Q07092 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.3
COL16A1Q07092 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.9□□□□□ -1.3
COL16A1Q07092 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL16A1Q07092 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL16A1Q07092 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL16A1Q07092 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
COL16A1Q07092 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL16A1Q07092 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.9□□□□□ -1.31
COL16A1Q07092 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL16A1Q07092 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.9□□□□□ -1.31
COL16A1Q07092 RNU1-74P-201ENST00000384108 171 ntBASIC6.9□□□□□ -1.31
COL16A1Q07092 SNORA77-201ENST00000408716 125 ntBASIC6.9□□□□□ -1.31
COL16A1Q07092 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.9□□□□□ -1.31
COL16A1Q07092 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.9□□□□□ -1.31
COL16A1Q07092 RPS17P17-201ENST00000419392 409 ntBASIC6.9□□□□□ -1.31
COL16A1Q07092 RPEP3-201ENST00000425462 676 ntBASIC6.9□□□□□ -1.31
COL16A1Q07092 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.9□□□□□ -1.31
COL16A1Q07092 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.9□□□□□ -1.31
COL16A1Q07092 AC097173.1-201ENST00000505862 819 ntBASIC6.9□□□□□ -1.31
COL16A1Q07092 MTCO1P35-201ENST00000515270 228 ntBASIC6.9□□□□□ -1.31
COL16A1Q07092 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.9□□□□□ -1.31
COL16A1Q07092 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.9□□□□□ -1.31
COL16A1Q07092 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.9□□□□□ -1.31
COL16A1Q07092 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.9□□□□□ -1.31
COL16A1Q07092 AC067931.1-201ENST00000624190 671 ntBASIC6.9□□□□□ -1.31
COL16A1Q07092 AP003400.3-201ENST00000624904 346 ntBASIC6.9□□□□□ -1.31
COL16A1Q07092 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL16A1Q07092 AC100757.1-201ENST00000616872 1835 ntBASIC6.9□□□□□ -1.31
COL16A1Q07092 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL16A1Q07092 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.89□□□□□ -1.31
COL16A1Q07092 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.89□□□□□ -1.31
COL16A1Q07092 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.89□□□□□ -1.31
COL16A1Q07092 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL16A1Q07092 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
COL16A1Q07092 SPATA31C1-201ENST00000420021 3895 ntBASIC6.89□□□□□ -1.31
COL16A1Q07092 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.89□□□□□ -1.31
COL16A1Q07092 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL16A1Q07092 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.89□□□□□ -1.31
COL16A1Q07092 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL16A1Q07092 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
COL16A1Q07092 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.89□□□□□ -1.31
COL16A1Q07092 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.89□□□□□ -1.31
COL16A1Q07092 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
COL16A1Q07092 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
COL16A1Q07092 RPL21P108-201ENST00000413857 481 ntBASIC6.89□□□□□ -1.31
COL16A1Q07092 CYCSP11-201ENST00000436426 315 ntBASIC6.89□□□□□ -1.31
COL16A1Q07092 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.89□□□□□ -1.31
COL16A1Q07092 EIF1P5-201ENST00000585002 234 ntBASIC6.89□□□□□ -1.31
COL16A1Q07092 AC093765.1-201ENST00000603758 881 ntBASIC6.89□□□□□ -1.31
COL16A1Q07092 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.89□□□□□ -1.31
COL16A1Q07092 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
COL16A1Q07092 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL16A1Q07092 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL16A1Q07092 OR56B2P-202ENST00000641377 2453 ntBASIC6.89□□□□□ -1.31
COL16A1Q07092 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL16A1Q07092 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL16A1Q07092 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL16A1Q07092 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL16A1Q07092 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
COL16A1Q07092 AC004158.1-201ENST00000564508 4319 ntBASIC6.88□□□□□ -1.31
COL16A1Q07092 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
COL16A1Q07092 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.88□□□□□ -1.31
COL16A1Q07092 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL16A1Q07092 RNA5SP509-201ENST00000364577 119 ntBASIC6.88□□□□□ -1.31
COL16A1Q07092 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
COL16A1Q07092 AL445189.1-201ENST00000405722 338 ntBASIC6.88□□□□□ -1.31
COL16A1Q07092 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL16A1Q07092 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.88□□□□□ -1.31
COL16A1Q07092 AF186996.5-201ENST00000418098 904 ntBASIC6.88□□□□□ -1.31
COL16A1Q07092 OR2B7P-201ENST00000429302 934 ntBASIC6.88□□□□□ -1.31
COL16A1Q07092 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.88□□□□□ -1.31
COL16A1Q07092 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.88□□□□□ -1.31
COL16A1Q07092 TCEA1P1-201ENST00000449716 880 ntBASIC6.88□□□□□ -1.31
COL16A1Q07092 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.88□□□□□ -1.31
COL16A1Q07092 RN7SL244P-201ENST00000493405 297 ntBASIC6.88□□□□□ -1.31
COL16A1Q07092 AP002812.1-201ENST00000495378 474 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms