Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AP003396.4-201ENST00000527574 265 ntBASIC5.5□□□□□ -1.53
RAE1P78406 PCNAP4-201ENST00000532690 730 ntBASIC5.5□□□□□ -1.53
RAE1P78406 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.5□□□□□ -1.53
RAE1P78406 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.5□□□□□ -1.53
RAE1P78406 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.5□□□□□ -1.53
RAE1P78406 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.5□□□□□ -1.53
RAE1P78406 AC096996.1-201ENST00000563813 325 ntBASIC5.5□□□□□ -1.53
RAE1P78406 ZNF322P1-201ENST00000568013 1209 ntBASIC5.5□□□□□ -1.53
RAE1P78406 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.5□□□□□ -1.53
RAE1P78406 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.5□□□□□ -1.53
RAE1P78406 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.5□□□□□ -1.53
RAE1P78406 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.5□□□□□ -1.53
RAE1P78406 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.5□□□□□ -1.53
RAE1P78406 AC084373.1-201ENST00000603311 235 ntBASIC5.5□□□□□ -1.53
RAE1P78406 AL160237.3-201ENST00000604114 1013 ntBASIC5.5□□□□□ -1.53
RAE1P78406 AL157392.4-201ENST00000609756 345 ntBASIC5.5□□□□□ -1.53
RAE1P78406 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.5□□□□□ -1.53
RAE1P78406 AC136428.4-201ENST00000634254 1155 ntBASIC5.5□□□□□ -1.53
RAE1P78406 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RAE1P78406 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RAE1P78406 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.5□□□□□ -1.53
RAE1P78406 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.5□□□□□ -1.53
RAE1P78406 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.5□□□□□ -1.53
RAE1P78406 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
RAE1P78406 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RAE1P78406 AC087516.1-201ENST00000561236 2428 ntBASIC5.49□□□□□ -1.53
RAE1P78406 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
RAE1P78406 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.49□□□□□ -1.53
RAE1P78406 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RAE1P78406 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RAE1P78406 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RAE1P78406 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RAE1P78406 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RAE1P78406 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.49□□□□□ -1.53
RAE1P78406 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.49□□□□□ -1.53
RAE1P78406 AC025470.1-201ENST00000510053 2032 ntBASIC5.49□□□□□ -1.53
RAE1P78406 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RAE1P78406 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RAE1P78406 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.49□□□□□ -1.53
RAE1P78406 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RAE1P78406 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RAE1P78406 RNA5SP477-201ENST00000362639 119 ntBASIC5.49□□□□□ -1.53
RAE1P78406 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RAE1P78406 RNU1-136P-201ENST00000384181 164 ntBASIC5.49□□□□□ -1.53
RAE1P78406 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RAE1P78406 RPL11P3-201ENST00000395256 523 ntBASIC5.49□□□□□ -1.53
RAE1P78406 BMS1P13-201ENST00000417301 885 ntBASIC5.49□□□□□ -1.53
RAE1P78406 VN1R21P-201ENST00000426703 765 ntBASIC5.49□□□□□ -1.53
RAE1P78406 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.49□□□□□ -1.53
RAE1P78406 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.49□□□□□ -1.53
RAE1P78406 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.49□□□□□ -1.53
RAE1P78406 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.49□□□□□ -1.53
RAE1P78406 AL358794.1-201ENST00000445689 381 ntBASIC5.49□□□□□ -1.53
RAE1P78406 EIF2S2P2-201ENST00000447161 982 ntBASIC5.49□□□□□ -1.53
RAE1P78406 OR7E116P-201ENST00000448529 957 ntBASIC5.49□□□□□ -1.53
RAE1P78406 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.49□□□□□ -1.53
RAE1P78406 LRRC37A14P-201ENST00000452297 462 ntBASIC5.49□□□□□ -1.53
RAE1P78406 Z83838.1-202ENST00000456225 839 ntBASIC5.49□□□□□ -1.53
RAE1P78406 MTCO2P6-201ENST00000463134 685 ntBASIC5.49□□□□□ -1.53
RAE1P78406 AL122020.1-201ENST00000472287 459 ntBASIC5.49□□□□□ -1.53
RAE1P78406 RN7SL57P-201ENST00000493687 290 ntBASIC5.49□□□□□ -1.53
RAE1P78406 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.49□□□□□ -1.53
RAE1P78406 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.49□□□□□ -1.53
RAE1P78406 GOLGA5P1-201ENST00000507317 980 ntBASIC5.49□□□□□ -1.53
RAE1P78406 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.49□□□□□ -1.53
RAE1P78406 SNORA19.3-201ENST00000516165 130 ntBASIC5.49□□□□□ -1.53
RAE1P78406 RNA5SP438-201ENST00000516561 112 ntBASIC5.49□□□□□ -1.53
RAE1P78406 AC091163.3-201ENST00000518269 1144 ntBASIC5.49□□□□□ -1.53
RAE1P78406 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.49□□□□□ -1.53
RAE1P78406 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.49□□□□□ -1.53
RAE1P78406 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.49□□□□□ -1.53
RAE1P78406 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.49□□□□□ -1.53
RAE1P78406 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.49□□□□□ -1.53
RAE1P78406 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.49□□□□□ -1.53
RAE1P78406 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.49□□□□□ -1.53
RAE1P78406 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.49□□□□□ -1.53
RAE1P78406 AL359513.1-201ENST00000614364 557 ntBASIC5.49□□□□□ -1.53
RAE1P78406 RMST_10.1-201ENST00000616309 154 ntBASIC5.49□□□□□ -1.53
RAE1P78406 AC009159.2-201ENST00000617603 606 ntBASIC5.49□□□□□ -1.53
RAE1P78406 AC005899.7-201ENST00000618199 588 ntBASIC5.49□□□□□ -1.53
RAE1P78406 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RAE1P78406 Z99129.2-201ENST00000619967 314 ntBASIC5.49□□□□□ -1.53
RAE1P78406 AP000676.4-201ENST00000624659 623 ntBASIC5.49□□□□□ -1.53
RAE1P78406 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.49□□□□□ -1.53
RAE1P78406 AL596275.2-207ENST00000641188 675 ntBASIC5.49□□□□□ -1.53
RAE1P78406 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RAE1P78406 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.49□□□□□ -1.53
RAE1P78406 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RAE1P78406 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.49□□□□□ -1.53
RAE1P78406 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RAE1P78406 DDX18P6-201ENST00000450119 1997 ntBASIC5.49□□□□□ -1.53
RAE1P78406 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RAE1P78406 AC092451.3-201ENST00000625067 1343 ntBASIC5.48□□□□□ -1.53
RAE1P78406 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RAE1P78406 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RAE1P78406 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RAE1P78406 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.48□□□□□ -1.53
RAE1P78406 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RAE1P78406 AC007342.7-201ENST00000624610 2337 ntBASIC5.48□□□□□ -1.53
RAE1P78406 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms