Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TNNC1P63316 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TNNC1P63316 AL353796.1-201ENST00000561542 3241 ntBASIC5.8□□□□□ -1.48
TNNC1P63316 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TNNC1P63316 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TNNC1P63316 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TNNC1P63316 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNNC1P63316 Z83820.1-201ENST00000456978 1499 ntBASIC5.79□□□□□ -1.48
TNNC1P63316 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
TNNC1P63316 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.79□□□□□ -1.48
TNNC1P63316 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.79□□□□□ -1.48
TNNC1P63316 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNNC1P63316 RNA5SP487-201ENST00000410186 122 ntBASIC5.79□□□□□ -1.48
TNNC1P63316 AL390774.1-201ENST00000411924 246 ntBASIC5.79□□□□□ -1.48
TNNC1P63316 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.79□□□□□ -1.48
TNNC1P63316 HSPD1P12-201ENST00000429127 1069 ntBASIC5.79□□□□□ -1.48
TNNC1P63316 FAM96AP1-201ENST00000430879 482 ntBASIC5.79□□□□□ -1.48
TNNC1P63316 RPL7L1P9-201ENST00000431298 745 ntBASIC5.79□□□□□ -1.48
TNNC1P63316 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.79□□□□□ -1.48
TNNC1P63316 AC090804.1-201ENST00000448870 490 ntBASIC5.79□□□□□ -1.48
TNNC1P63316 AC016559.2-201ENST00000510759 359 ntBASIC5.79□□□□□ -1.48
TNNC1P63316 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.79□□□□□ -1.48
TNNC1P63316 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.79□□□□□ -1.48
TNNC1P63316 AC027026.1-201ENST00000532323 742 ntBASIC5.79□□□□□ -1.48
TNNC1P63316 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNNC1P63316 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.79□□□□□ -1.48
TNNC1P63316 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.79□□□□□ -1.48
TNNC1P63316 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TNNC1P63316 MTCYBP13-201ENST00000578634 1093 ntBASIC5.79□□□□□ -1.48
TNNC1P63316 MIR3176-201ENST00000582210 90 ntBASIC5.79□□□□□ -1.48
TNNC1P63316 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.79□□□□□ -1.48
TNNC1P63316 AC107993.1-201ENST00000591343 684 ntBASIC5.79□□□□□ -1.48
TNNC1P63316 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.79□□□□□ -1.48
TNNC1P63316 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.79□□□□□ -1.48
TNNC1P63316 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TNNC1P63316 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
TNNC1P63316 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TNNC1P63316 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TNNC1P63316 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
TNNC1P63316 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNNC1P63316 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TNNC1P63316 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNNC1P63316 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TNNC1P63316 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TNNC1P63316 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TNNC1P63316 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNNC1P63316 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TNNC1P63316 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TNNC1P63316 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TNNC1P63316 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNNC1P63316 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNNC1P63316 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
TNNC1P63316 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TNNC1P63316 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.78□□□□□ -1.48
TNNC1P63316 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNNC1P63316 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.78□□□□□ -1.48
TNNC1P63316 RNA5SP339-201ENST00000390987 122 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 HSPA8P15-201ENST00000401676 786 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.78□□□□□ -1.48
TNNC1P63316 GAPDHP25-201ENST00000447061 1001 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.78□□□□□ -1.48
TNNC1P63316 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.78□□□□□ -1.48
TNNC1P63316 IGBP1P4-201ENST00000503202 879 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.78□□□□□ -1.48
TNNC1P63316 HMGN1P9-201ENST00000515212 298 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TNNC1P63316 OR8G3P-201ENST00000533406 921 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TNNC1P63316 AL049779.2-201ENST00000553847 315 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.78□□□□□ -1.48
TNNC1P63316 MIR4489-201ENST00000578869 62 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 RN7SL356P-201ENST00000582228 248 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 PRPF19P1-201ENST00000584766 898 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.78□□□□□ -1.48
TNNC1P63316 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.78□□□□□ -1.48
TNNC1P63316 IMMP1LP3-201ENST00000604197 224 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 AC136428.4-201ENST00000634254 1155 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TNNC1P63316 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNNC1P63316 AC003985.2-201ENST00000562268 1669 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNNC1P63316 ADAM5-202ENST00000399789 1942 ntBASIC5.78□□□□□ -1.48
TNNC1P63316 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TNNC1P63316 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TNNC1P63316 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TNNC1P63316 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TNNC1P63316 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TNNC1P63316 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TNNC1P63316 MAPK10-338ENST00000641647 3362 ntBASIC5.77□□□□□ -1.49
TNNC1P63316 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TNNC1P63316 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
TNNC1P63316 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TNNC1P63316 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TNNC1P63316 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TNNC1P63316 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TNNC1P63316 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TNNC1P63316 AC007618.1-201ENST00000366455 732 ntBASIC5.77□□□□□ -1.49
TNNC1P63316 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TNNC1P63316 DBIP1-201ENST00000401435 260 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms